Xenbase Image ID: 24100

Fig. 4. The expression patterns of clones identified by the functional screen, examined by whole mount in situ hybridization using X. tropicalis embryos. Twenty-nine out of the 31 positive clones identified in the screen displayed identifiable in situ patterns of expression. The clones were divided into each of seven functional groups on the basis of their predicted/established function (A, transcription; B, cell signaling; C, post-transcription/translation; D, cell-cycle/apoptosis; E, metabolism; F, other functions; G, functionally unknown). The images are ordered by gene names (black). The main expression domains of each clone at all stages analyzed are indicated in red, although not all of these domains are represented in the photographs presented (cc, ciliated cells; cns, central nervous system; dt, distal tubules; e, eye; it, intermediate tubules; ms, migrating somite; n, primary neuron; ns, nephrostomes; op, olfactory pit; ov, otic vesicle; pa, pharyngeal arches; pcv, posterior cardinal veins; pn, pronephros; s, somite; vbi, ventral blood island). The numbers in each photograph indicate the developmental stage of embryos shown. Other abbreviations are: A, anterior view (dorsal is up); D, dorsal view (anterior is left); L, lateral view (anterior is left, dorsal is up). Image published in: Kyuno J et al. (2008) Copyright © 2008. Image reproduced with permission of the Publisher, Elsevier B. V. Gene Synonyms Species Stage(s) Tissue cpeb3 LOC108696127, LOC108697402 X. tropicalis Sometime during NF stage 18 to NF stage 39 central nervous system pronephric nephron eye otic vesicle pharyngeal arch csnk2b ck2, ck2b, CK2beta, ck2n, CK II beta, csk2b, g5a X. tropicalis Sometime during NF stage 18 to NF stage 40 central nervous system eye somite pharyngeal arch pronephric kidney dusp4 X. tropicalis Sometime during NF stage 19 to NF stage 40 central nervous system eye olfactory pit pharyngeal arch ventral blood island cops2 X. tropicalis Throughout NF stage 20 intermediate mesoderm neural tube neural plate pre-chordal neural plate eye primordium optic field fubp1 fbp, fbp1, fubp, fubp1-a, fubp1-b, FUSE X. tropicalis Throughout NF stage 20 intermediate mesoderm neural tube neural plate pre-chordal neural plate chordal neural plate neural plate border hsf3 LOC108698253 X. tropicalis Throughout NF stage 20 neural tube neural plate pre-chordal neural plate chordal neural plate neural plate border paraxial mesoderm supt6h emb-5, spt6, spt6h X. tropicalis Sometime during NF stage 20 to NF stage 28 central nervous system eye somite otic vesicle pharyngeal arch pronephric mesenchyme pronephric kidney paraxial mesoderm spinal cord brain hindbrain csnk1g1 X. tropicalis Sometime during NF stage 20 to NF stage 28 central nervous system eye somite otic vesicle pharyngeal arch pronephric mesenchyme sox7 xSox7 X. tropicalis Sometime during NF stage 20 to NF stage 33 and 34 ciliated epidermal cell central nervous system olfactory pit pharyngeal arch posterior cardinal vein pronephric kidney epidermis epidermis outer layer neuroectoderm olfactory placode hindbrain elavl2 el-1, elavl2-a, elavl2-b, elrB, hel-n1, heln1, hub X. tropicalis Sometime during NF stage 20 to NF stage 33 and 34 central nervous system eye srsf3 LOC108708069, sfrs3, srp20 X. tropicalis Sometime during NF stage 20 to NF stage 33 and 34 central nervous system eye somite otic vesicle pharyngeal arch pronephric kidney ventral blood island srsf5 hrs, sfrs5, srp40 X. tropicalis Sometime during NF stage 20 to NF stage 40 central nervous system eye somite otic vesicle pharyngeal arch pronephric kidney ahctf1 elys, MGC86530 X. tropicalis Throughout NF stage 29 and 30 central nervous system eye otic vesicle pharyngeal arch pronephric kidney olfactory pit neural tube brain forebrain hindbrain midbrain-hindbrain boundary KIAA0586 talpid3 X. tropicalis Throughout NF stage 29 and 30 ciliated epidermal cell central nervous system eye pronephric nephrostome olfactory pit otic vesicle lrr1 4-1bblrr, lrr-1, ppil5 X. tropicalis Throughout NF stage 29 and 30 eye otic vesicle pharyngeal arch pronephric kidney cops2 X. tropicalis Throughout NF stage 29 and 30 pharyngeal arch pronephric kidney eye otic vesicle spinal cord neural tube brain dusp11 X. tropicalis Throughout NF stage 32 eye somite olfactory pit otic vesicle pharyngeal arch pronephric kidney snrpd1 MGC69276 X. tropicalis Throughout NF stage 32 central nervous system eye somite otic vesicle pharyngeal arch posterior cardinal vein pronephric kidney ventral blood island fubp1 fbp, fbp1, fubp, fubp1-a, fubp1-b, FUSE X. tropicalis Throughout NF stage 33 and 34 central nervous system eye somite olfactory pit otic vesicle pharyngeal arch pronephric kidney lateral plate mesoderm spinal cord brain hypaxial muscle tail tip hsf3 LOC108698253 X. tropicalis Throughout NF stage 33 and 34 central nervous system eye somite otic vesicle pharyngeal arch pronephric kidney ventral blood island olfactory pit pronephric duct intermediate mesoderm spinal cord brain tail tip Image source: Published Larger Image Printer Friendly View

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