Publications By Yuzuru Ito

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In situ structural biology using in-cell NMR., Nishida N, Ito Y, Shimada I., Biochim Biophys Acta Gen Subj. February 1, 2020; 1864 (2): 129364.

Roles of Xenopus chemokine ligand CXCLh (XCXCLh) in early embryogenesis., Goto T, Ito Y, Michiue T., Dev Growth Differ. May 1, 2018; 60 (4): 226-238.

Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis., Haramoto Y, Saijyo T, Tanaka T, Furuno N, Suzuki A, Ito Y, Kondo M, Taira M, Takahashi S., Dev Biol. June 15, 2017; 426 (2): 374-383.

Development of the Larval Amphibian Growth and Development Assay: Effects of benzophenone-2 exposure in Xenopus laevis from embryo to juvenile., Haselman JT, Sakurai M, Watanabe N, Goto Y, Onishi Y, Ito Y, Onoda Y, Kosian PA, Korte JJ, Johnson RD, Iguchi T, Degitz SJ., J Appl Toxicol. December 1, 2016; 36 (12): 1651-1661.

Genome evolution in the allotetraploid frog Xenopus laevis., Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS., Nature. October 20, 2016; 538 (7625): 336-343.

Complete mitochondrial genome of "Xenopus tropicalis" Asashima line (Anura: Pipidae), a possible undescribed species., Haramoto Y, Oshima T, Takahashi S, Asashima M, Ito Y, Kurabayashi A., Mitochondrial DNA A DNA Mapp Seq Anal. September 1, 2016; 27 (5): 3341-3.

Physicochemical and biological characterizations of Pxt peptides from amphibian (Xenopus tropicalis) skin., Shigeri Y, Horie M, Yoshida T, Hagihara Y, Imura T, Inagaki H, Haramoto Y, Ito Y, Asashima M., J Biochem. June 1, 2016; 159 (6): 619-29.

Functional characteristics of L1156F-CFTR associated with alcoholic chronic pancreatitis in Japanese., Kondo S, Fujiki K, Ko SB, Yamamoto A, Nakakuki M, Ito Y, Shcheynikov N, Kitagawa M, Naruse S, Ishiguro H., Am J Physiol Gastrointest Liver Physiol. August 15, 2015; 309 (4): G260-9.

Insulin-like factor regulates neural induction through an IGF1 receptor-independent mechanism., Haramoto Y, Takahashi S, Oshima T, Onuma Y, Ito Y, Asashima M., Sci Rep. January 12, 2015; 5 11603.

Aminolevulinate synthase 2 mediates erythrocyte differentiation by regulating larval globin expression during Xenopus primary hematopoiesis., Ogawa-Otomo A, Kurisaki A, Ito Y., Biochem Biophys Res Commun. January 2, 2015; 456 (1): 476-81.

Identification of novel peptides from amphibian (Xenopus tropicalis) skin by direct tissue MALDI-MS analysis., Shigeri Y, Yasuda A, Hagihara Y, Nishi K, Watanabe K, Imura T, Inagaki H, Haramoto Y, Ito Y, Asashima M., FEBS J. January 1, 2015; 282 (1): 102-13.

Cell-mass structures expressing the aromatase gene Cyp19a1 lead to ovarian cavities in Xenopus laevis., Mawaribuchi S, Ikeda N, Fujitani K, Ito Y, Onuma Y, Komiya T, Takamatsu N, Ito M., Endocrinology. October 1, 2014; 155 (10): 3996-4005.

Na+/H+ and Na+/NH+4 activities of zebrafish NHE3b expressed in Xenopus oocytes., Ito Y, Kato A, Hirata T, Hirose S, Romero MF., Am J Physiol Regul Integr Comp Physiol. March 1, 2014; 306 (5): R315-27.

Characterization of the insulin-like growth factor binding protein family in Xenopus tropicalis., Haramoto Y, Oshima T, Takahashi S, Ito Y., Int J Dev Biol. January 1, 2014; 58 (9): 705-11.

A lectin-based glycomic approach to identify characteristic features of Xenopus embryogenesis., Onuma Y, Tateno H, Tsuji S, Hirabayashi J, Ito Y, Asashima M., PLoS One. January 1, 2013; 8 (2): e56581.

Characterization of CXC-type chemokine molecules in early Xenopus laevis development., Goto T, Michiue T, Ito Y, Asashima M., Int J Dev Biol. January 1, 2013; 57 (1): 41-7.

KDEL tagging: a method for generating dominant-negative inhibitors of the secretion of TGF-beta superfamily proteins., Matsukawa S, Moriyama Y, Hayata T, Sasaki H, Ito Y, Asashima M, Kuroda H., Int J Dev Biol. January 1, 2012; 56 (5): 351-6.

mNanog possesses dorsal mesoderm-inducing ability by modulating both BMP and Activin/nodal signaling in Xenopus ectodermal cells., Miyazaki A, Ishii K, Yamashita S, Nejigane S, Matsukawa S, Ito Y, Onuma Y, Asashima M, Michiue T., PLoS One. January 1, 2012; 7 (10): e46630.

Claudin5 genes encoding tight junction proteins are required for Xenopus heart formation., Yamagishi M, Ito Y, Ariizumi T, Komazaki S, Danno H, Michiue T, Asashima M., Dev Growth Differ. September 1, 2010; 52 (7): 665-75.

Intensely fluorescent azobenzenes: synthesis, crystal structures, effects of substituents, and application to fluorescent vital stain., Yoshino J, Furuta A, Kambe T, Itoi H, Kano N, Kawashima T, Ito Y, Asashima M., Chemistry. May 3, 2010; 16 (17): 5026-35.

In vitro organogenesis using multipotent cells., Kurisaki A, Ito Y, Onuma Y, Intoh A, Asashima M., Hum Cell. February 1, 2010; 23 (1): 1-14.

Cloning of noggin gene from hydra and analysis of its functional conservation using Xenopus laevis embryos., Chandramore K, Ito Y, Takahashi S, Asashima M, Ghaskadbi S., Evol Dev. January 1, 2010; 12 (3): 267-74.

The RNA-binding protein Mex3b has a fine-tuning system for mRNA regulation in early Xenopus development., Takada H, Kawana T, Ito Y, Kikuno RF, Mamada H, Araki T, Koga H, Asashima M, Taira M., Development. July 1, 2009; 136 (14): 2413-22.

In vitro organogenesis from undifferentiated cells in Xenopus., Asashima M, Ito Y, Chan T, Michiue T, Nakanishi M, Suzuki K, Hitachi K, Okabayashi K, Kondow A, Ariizumi T., Dev Dyn. June 1, 2009; 238 (6): 1309-20.

High-resolution multi-dimensional NMR spectroscopy of proteins in human cells., Inomata K, Ohno A, Tochio H, Isogai S, Tenno T, Nakase I, Takeuchi T, Futaki S, Ito Y, Hiroaki H, Shirakawa M., Nature. March 5, 2009; 458 (7234): 106-9.

IGFBP-4 is an inhibitor of canonical Wnt signalling required for cardiogenesis., Zhu W, Shiojima I, Ito Y, Li Z, Ikeda H, Yoshida M, Naito AT, Nishi J, Ueno H, Umezawa A, Minamino T, Nagai T, Kikuchi A, Asashima M, Komuro I., Nature. July 17, 2008; 454 (7202): 345-9.

XHAPLN3 plays a key role in cardiogenesis by maintaining the hyaluronan matrix around heart anlage., Ito Y, Seno S, Nakamura H, Fukui A, Asashima M., Dev Biol. July 1, 2008; 319 (1): 34-45.

Cephalic hedgehog expression is regulated directly by Sox17 in endoderm development of Xenopus laevis., Yagi Y, Ito Y, Kuhara S, Tashiro K., Cytotechnology. June 1, 2008; 57 (2): 151-9.

A crucial role of a high mobility group protein HMGA2 in cardiogenesis., Monzen K, Ito Y, Naito AT, Kasai H, Hiroi Y, Hayashi D, Shiojima I, Yamazaki T, Miyazono K, Asashima M, Nagai R, Komuro I., Nat Cell Biol. May 1, 2008; 10 (5): 567-74.

Runx1 is involved in primitive erythropoiesis in the mouse., Yokomizo T, Hasegawa K, Ishitobi H, Osato M, Ema M, Ito Y, Yamamoto M, Takahashi S., Blood. April 15, 2008; 111 (8): 4075-80.

Isolation and differentiation of Xenopus animal cap cells., Ariizumi T, Takahashi S, Chan TC, Ito Y, Michiue T, Asashima M., Curr Protoc Stem Cell Biol. June 1, 2007; Chapter 1 Unit 1D.5.

In-cell NMR spectroscopy of proteins inside Xenopus laevis oocytes., Sakai T, Tochio H, Tenno T, Ito Y, Kokubo T, Hiroaki H, Shirakawa M., J Biomol NMR. November 1, 2006; 36 (3): 179-88.

Xapelin and Xmsr are required for cardiovascular development in Xenopus laevis., Inui M, Fukui A, Ito Y, Asashima M., Dev Biol. October 1, 2006; 298 (1): 188-200.

CyNodal, the Japanese newt nodal-related gene, is expressed in the left side of the lateral plate mesoderm and diencephalon., Ito Y, Oinuma T, Takano K, Komazaki S, Obata S, Asashima M., Gene Expr Patterns. March 1, 2006; 6 (3): 294-8.

[In vitro organogenesis using amphibian pluripotent cells]., Ito Y, Ariizumi T, Asashima M., Tanpakushitsu Kakusan Koso. May 1, 2005; 50 (6 Suppl): 699-705.

In synergy with noggin and follistatin, Xenopus nodal-related gene induces sonic hedgehog on notochord and floor plate., Ito Y, Kuhara S, Tashiro K., Biochem Biophys Res Commun. March 2, 2001; 281 (3): 714-9.

Dorsal induction from dorsal vegetal cells in Xenopus occurs after mid-blastula transition., Nagano T, Ito Y, Tashiro K, Kobayakawa Y, Sakai M., Mech Dev. May 1, 2000; 93 (1-2): 3-14.

Two closely-related left-right asymmetrically expressed genes, lefty-1 and lefty-2: their distinct expression domains, chromosomal linkage and direct neuralizing activity in Xenopus embryos., Meno C, Ito Y, Saijoh Y, Matsuda Y, Tashiro K, Kuhara S, Hamada H., Genes Cells. August 1, 1997; 2 (8): 513-24.

Expression of exogenous genes in Xenopus oocytes, eggs, and embryos., Shiokawa K, Koga C, Ito Y, Shibata M., Methods Mol Biol. January 1, 1997; 62 247-70.

Cloning and expression studies of cDNA for a novel Xenopus cadherin (XmN-cadherin), expressed maternally and later neural-specifically in embryogenesis., Tashiro K, Tooi O, Nakamura H, Koga C, Ito Y, Hikasa H, Shiokawa K., Mech Dev. February 1, 1996; 54 (2): 161-71.

Potassium channels cloned from NG108-15 neuroblastoma-glioma hybrid cells. Functional expression in Xenopus oocytes and mammalian fibroblast cells., Yokoyama S, Kawamura T, Ito Y, Hoshi N, Enomoto K, Higashida H., Ann N Y Acad Sci. December 20, 1993; 707 60-73.

Potassium channels cloned from neuroblastoma cells display slowly inactivating outward currents in Xenopus oocytes., Ito Y, Yokoyama S, Higashida H., Proc Biol Sci. May 22, 1992; 248 (1322): 95-101.

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