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Discovery of numerous novel Helitron-like elements in eukaryote genomes using HELIANO. , Li Z, Gilbert C, Peng H, Pollet N ., Nucleic Acids Res. August 9, 2024;
Transcriptomic analysis of the trade-off between endurance and burst-performance in the frog Xenopus allofraseri. , Ducret V, Richards AJ, Videlier M, Scalvenzi T, Moore KA, Paszkiewicz K, Bonneaud C, Pollet N , Herrel A., BMC Genomics. March 23, 2021; 22 (1): 204.
Evolutionary Dynamics of the Repetitive DNA in the Karyotypes of Pipa carvalhoi and Xenopus tropicalis (Anura, Pipidae). , Zattera ML, Gazolla CB, Soares AA, Gazoni T, Pollet N , Recco-Pimentel SM, Bruschi DP ., Front Genet. March 4, 2020; 11 637.
Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina-Blastocystis Stramenopile Lineage. , Yubuki N, Galindo LJ, Reboul G, López-García P, Brown MW, Pollet N , Moreira D., Mol Biol Evol. March 1, 2020; 37 (3): 651-659.
Identification of novel cis-regulatory elements of Eya1 in Xenopus laevis using BAC recombineering. , Maharana SK , Pollet N , Schlosser G ., Sci Rep. November 3, 2017; 7 (1): 15033.
Construction and characterization of a BAC library for functional genomics in Xenopus tropicalis. , Spirhanzlova P, Dhorne-Pollet S, Fellah JS, Da Silva C, Tlapakova T , Labadie K, Weissenbach J, Poulain J, Jaffredo T, Wincker P, Krylov V , Pollet N ., Dev Biol. June 15, 2017; 426 (2): 255-260.
Implication of thyroid hormone signaling in neural crest cells migration: Evidence from thyroid hormone receptor beta knockdown and NH3 antagonist studies. , Bronchain OJ , Chesneau A, Monsoro-Burq AH , Jolivet P, Paillard E, Scanlan TS, Demeneix BA , Sachs LM , Pollet N ., Mol Cell Endocrinol. January 5, 2017; 439 233-246.
Generation of BAC transgenic tadpoles enabling live imaging of motoneurons by using the urotensin II-related peptide (ust2b) gene as a driver. , Bougerol M, Auradé F, Lambert FM , Le Ray D , Combes D, Thoby-Brisson M, Relaix F, Pollet N , Tostivint H., PLoS One. February 6, 2015; 10 (2): e0117370.
Comparison of T7E1 and surveyor mismatch cleavage assays to detect mutations triggered by engineered nucleases. , Vouillot L, Thélie A, Pollet N ., G3 (Bethesda). January 7, 2015; 5 (3): 407-15.
Microbiota and mucosal immunity in amphibians. , Colombo BM, Scalvenzi T, Benlamara S, Pollet N ., Front Immunol. January 1, 2015; 6 111.
Insights on genome size evolution from a miniature inverted repeat transposon driving a satellite DNA. , Scalvenzi T, Pollet N ., Mol Phylogenet Evol. December 1, 2014; 81 1-9.
Pax3 and Zic1 trigger the early neural crest gene regulatory network by the direct activation of multiple key neural crest specifiers. , Plouhinec JL, Roche DD, Pegoraro C, Figueiredo AL, Maczkowiak F, Brunet LJ, Milet C, Vert JP, Pollet N , Harland RM , Monsoro-Burq AH ., Dev Biol. February 15, 2014; 386 (2): 461-72.
Validation of novel reference genes for RT-qPCR studies of gene expression in Xenopus tropicalis during embryonic and post-embryonic development. , Dhorne-Pollet S, Thélie A, Pollet N ., Dev Dyn. June 1, 2013; 242 (6): 709-17.
A large scale screen for neural stem cell markers in Xenopus retina. , Parain K , Mazurier N, Bronchain O , Borday C, Cabochette P, Chesneau A, Colozza G , El Yakoubi W, Hamdache J, Locker M , Gilchrist MJ , Pollet N , Perron M ., Dev Neurobiol. April 1, 2012; 72 (4): 491-506.
Characterization of a novel Xenopus tropicalis cell line as a model for in vitro studies. , Sinzelle L, Thuret R , Hwang HY, Herszberg B, Paillard E, Bronchain OJ , Stemple DL , Dhorne-Pollet S, Pollet N ., Genesis. March 1, 2012; 50 (3): 316-24.
Databases of gene expression in Xenopus development. , Gilchrist MJ , Pollet N ., Methods Mol Biol. January 1, 2012; 917 319-45.
Characterization of a Xenopus tropicalis endogenous retrovirus with developmental and stress-dependent expression. , Sinzelle L, Carradec Q, Paillard E, Bronchain OJ , Pollet N ., J Virol. March 1, 2011; 85 (5): 2167-79.
Tissue-specific expression of Sarcoplasmic/Endoplasmic Reticulum Calcium ATPases ( ATP2A/SERCA) 1, 2, 3 during Xenopus laevis development. , Pegoraro C, Pollet N , Monsoro-Burq AH ., Gene Expr Patterns. January 1, 2011; 11 (1-2): 122-8.
Nuclear importation of Mariner transposases among eukaryotes: motif requirements and homo-protein interactions. , Demattei MV, Hedhili S, Sinzelle L, Bressac C, Casteret S, Moiré N, Cambefort J, Thomas X, Pollet N , Gantet P, Bigot Y., PLoS One. January 1, 2011; 6 (8): e23693.
Identification of the pre-T-cell receptor alpha chain in nonmammalian vertebrates challenges the structure-function of the molecule. , Smelty P, Marchal C, Renard R, Sinzelle L, Pollet N , Dunon D, Jaffredo T, Sire JY, Fellah JS., Proc Natl Acad Sci U S A. November 16, 2010; 107 (46): 19991-6.
The genome of the Western clawed frog Xenopus tropicalis. , Hellsten U, Harland RM , Gilchrist MJ , Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL , Blumberg B , Dichmann DS , Dubchak I, Amaya E , Detter JC, Fletcher R, Gerhard DS, Goodstein D, Graves T, Grigoriev IV, Grimwood J, Kawashima T, Lindquist E, Lucas SM, Mead PE , Mitros T, Ogino H , Ohta Y, Poliakov AV, Pollet N , Robert J , Salamov A, Sater AK , Schmutz J, Terry A , Vize PD , Warren WC, Wells D, Wills A , Wilson RK, Zimmerman LB , Zorn AM , Grainger R , Grammer T , Khokha MK , Richardson PM , Rokhsar DS ., Science. April 30, 2010; 328 (5978): 633-6.
Reduced levels of survival motor neuron protein leads to aberrant motoneuron growth in a Xenopus model of muscular atrophy. , Ymlahi-Ouazzani Q, J Bronchain O , Paillard E, Ballagny C, Chesneau A, Jadaud A, Mazabraud A , Pollet N ., Neurogenetics. February 1, 2010; 11 (1): 27-40.
Expression of immune genes during metamorphosis of Xenopus: a survey. , Pollet N ., Front Biosci (Landmark Ed). January 1, 2010; 15 (1): 348-58.
Database of queryable gene expression patterns for Xenopus. , Gilchrist MJ , Christensen MB, Bronchain O , Brunet F, Chesneau A, Fenger U, Geach TJ , Ironfield HV, Kaya F, Kricha S, Lea R, Massé K , Néant I, Paillard E, Parain K , Perron M , Sinzelle L, Souopgui J, Thuret R , Ymlahi-Ouazzani Q, Pollet N ., Dev Dyn. June 1, 2009; 238 (6): 1379-88.
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data. , Gilchrist MJ , Christensen MB, Harland R , Pollet N , Smith JC , Ueno N , Papalopulu N ., BMC Bioinformatics. October 17, 2008; 9 442.
Transgenesis procedures in Xenopus. , Chesneau A, Sachs LM , Chai N, Chen Y , Du Pasquier L , Loeber J, Pollet N , Reilly M, Weeks DL , Bronchain OJ ., Biol Cell. September 1, 2008; 100 (9): 503-21.
An ontology for Xenopus anatomy and development. , Segerdell E , Bowes JB , Pollet N , Vize PD ., BMC Dev Biol. June 23, 2008; 8 92.
Identification of CUG-BP1/ EDEN-BP target mRNAs in Xenopus tropicalis. , Graindorge A, Le Tonquèze O, Thuret R , Pollet N , Osborne HB , Audic Y ., Nucleic Acids Res. April 1, 2008; 36 (6): 1861-70.
Evaluation of time profile reconstruction from complex two-color microarray designs. , Fierro AC, Thuret R , Engelen K, Bernot G, Marchal K, Pollet N ., BMC Bioinformatics. January 3, 2008; 9 (1): 1.
Xenbase: a Xenopus biology and genomics resource. , Bowes JB , Snyder KA , Segerdell E , Gibb R, Jarabek C , Noumen E, Pollet N , Vize PD ., Nucleic Acids Res. January 1, 2008; 36 (Database issue): D761-7.
The olig family: phylogenetic analysis and early gene expression in Xenopus tropicalis. , Bronchain OJ , Pollet N , Ymlahi-Ouazzani Q, Dhorne-Pollet S, Helbling JC, Lecarpentier JE, Percheron K, Wegnez M ., Dev Genes Evol. July 1, 2007; 217 (7): 485-97.
Exploring nervous system transcriptomes during embryogenesis and metamorphosis in Xenopus tropicalis using EST analysis. , Fierro AC, Thuret R , Coen L, Perron M , Demeneix BA , Wegnez M , Gyapay G, Weissenbach J, Wincker P, Mazabraud A , Pollet N ., BMC Genomics. May 16, 2007; 8 118.
tBid mediated activation of the mitochondrial death pathway leads to genetic ablation of the lens in Xenopus laevis. , Du Pasquier D, Chesneau A, Ymlahi-Ouazzani Q, Boistel R, Pollet N , Ballagny C, Sachs LM , Demeneix B, Mazabraud A ., Genesis. January 1, 2007; 45 (1): 1-10.
Generation of trangenic Xenopus laevis using the Sleeping Beauty transposon system. , Sinzelle L, Vallin J, Coen L, Chesneau A, Du Pasquier D, Pollet N , Demeneix B, Mazabraud A ., Transgenic Res. December 1, 2006; 15 (6): 751-60.
Identification of post-transcriptionally regulated Xenopus tropicalis maternal mRNAs by microarray. , Graindorge A, Thuret R , Pollet N , Osborne HB , Audic Y ., Nucleic Acids Res. February 7, 2006; 34 (3): 986-95.
The mariner transposons belonging to the irritans subfamily were maintained in chordate genomes by vertical transmission. , Sinzelle L, Chesneau A, Bigot Y, Mazabraud A , Pollet N ., J Mol Evol. January 1, 2006; 62 (1): 53-65.
Insights from Xenopus genomes. , Pollet N , Mazabraud A ., Genome Dyn. January 1, 2006; 2 138-153.
Post-transcriptional regulation in Xenopus embryos: role and targets of EDEN-BP. , Osborne HB , Gautier-Courteille C , Graindorge A, Barreau C, Audic Y , Thuret R , Pollet N , Paillard L ., Biochem Soc Trans. December 1, 2005; 33 (Pt 6): 1541-3.
Characterization of multiple lineages of Tc1-like elements within the genome of the amphibian Xenopus tropicalis. , Sinzelle L, Pollet N , Bigot Y, Mazabraud A ., Gene. April 11, 2005; 349 187-96.
An atlas of differential gene expression during early Xenopus embryogenesis. , Pollet N , Muncke N, Verbeek B, Li Y, Fenger U, Delius H, Niehrs C ., Mech Dev. March 1, 2005; 122 (3): 365-439.
Reliability of gene expression ratios for cDNA microarrays in multiconditional experiments with a reference design. , König R, Baldessari D, Pollet N , Niehrs C , Eils R., Nucleic Acids Res. February 13, 2004; 32 (3): e29.
The transmembrane protein XFLRT3 forms a complex with FGF receptors and promotes FGF signalling. , Böttcher RT, Pollet N , Delius H, Niehrs C ., Nat Cell Biol. January 1, 2004; 6 (1): 38-44.
In situ analysis of gene expression in Xenopus embryos. , Pollet N , Delius H, Niehrs C ., C R Biol. January 1, 2003; 326 (10-11): 1011-7.
Cyclic expression of esr9 gene in Xenopus presomitic mesoderm. , Li Y, Fenger U, Niehrs C , Pollet N ., Differentiation. January 1, 2003; 71 (1): 83-9.
Cloning and characterization of Plx2 and Plx3, two additional Polo-like kinases from Xenopus laevis. , Duncan PI, Pollet N , Niehrs C , Nigg EA., Exp Cell Res. October 15, 2001; 270 (1): 78-87.
Nrarp is a novel intracellular component of the Notch signaling pathway. , Lamar E, Deblandre G, Wettstein D, Gawantka V, Pollet N , Niehrs C , Kintner C ., Genes Dev. August 1, 2001; 15 (15): 1885-99.
Increased XRALDH2 activity has a posteriorizing effect on the central nervous system of Xenopus embryos. , Chen Y , Pollet N , Niehrs C , Pieler T ., Mech Dev. March 1, 2001; 101 (1-2): 91-103.
In silico analysis of gene expression patterns during early development of Xenopus laevis. , Pollet N , Schmidt HA, Gawantka V, Niehrs C , Vingron M., Pac Symp Biocomput. January 1, 2000; 443-54.
Axeldb: a Xenopus laevis database focusing on gene expression. , Pollet N , Schmidt HA, Gawantka V, Vingron M, Niehrs C ., Nucleic Acids Res. January 1, 2000; 28 (1): 139-40.
Synexpression groups in eukaryotes. , Niehrs C , Pollet N ., Nature. December 2, 1999; 402 (6761): 483-7.