Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (8) Nucleotides (216) Proteins (49) Interactants (146) Wiki
XB-GENEPAGE-1007471

Show:     All X. tropicalis X. laevis

Nucleotide sequences for bckdha - All

RefSeq mRNAs(4)
Models - Gene (27)
Models - mRNA (35)
mRNAs (5)
ESTs (108)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001097214 NM_001097214.1 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1581 bp NP_001090683 X. tropicalis
XM_012967799 XM_012967799.3 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X1 2487 bp XP_012823253 X. tropicalis
XM_018230251 XM_018230251.2 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1789 bp XP_018085740 X. laevis.L
XM_018233774 XM_018233774.2 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1172 bp XP_018089263 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g35619 X. laevis.L
NCBI 10.1 XBXL10_1g38372 X. laevis.S
NCBI 10.0 XBXT10g008791 X. tropicalis
ENSEMBL 10.0 bckdha X. tropicalis
Xenbase 9.2 gene14100 X. laevis.L
Xenbase 9.2 gene46572 X. laevis.S
JGI 9.1 Xelaev18039349m.g X. laevis.L
JGI 9.1 Xelaev18042548m.g X. laevis.S
Xenbase 9.1 gene4479 X. tropicalis
ENSEMBL 9.1 bckdha X. tropicalis
JGI 7.1 Xetro.H01331 X. tropicalis
JGI 6.0 XeXenL6RMv10025946m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018753 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4810012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_481000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_481000042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4810137 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4810031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4810030 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4810030 X. tropicalis
JGI 4.1 gw1.481.31.1 X. tropicalis
JGI 4.1 gw1.481.30.1 X. tropicalis
JGI 4.1 gw1.481.137.1 X. tropicalis
JGI 4.1 e_gw1.481.31.1 X. tropicalis
JGI 4.1 e_gw1.481.30.1 X. tropicalis
JGI 4.1 e_gw1.481.137.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4810042 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA67245 X. laevis.L
NCBI 10.1 XBmRNA72491 X. laevis.S
NCBI 10.0 mRNA043562 X. tropicalis
ENSEMBL 10.0 ENSXETT00000040622 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074934 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083970 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104838 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082865 X. tropicalis
Xenbase 9.2 rna41068 X. laevis.L
Xenbase 9.2 rna91398 X. laevis.S
ENSEMBL 9.1 ENSXETT00000082865 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083970 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104838 X. tropicalis
Xenbase 9.1 rna14585 X. tropicalis
JGI 9.1 Xelaev18039349m X. laevis.L
JGI 9.1 Xelaev18042548m X. laevis.S
ENSEMBL 9.1 ENSXETT00000040622 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074934 X. tropicalis
JGI 7.1 Xetro.H01331.1 X. tropicalis
JGI 6.0 XeXenL6RMv10025946m X. laevis.L
JGI 4.1 estExt_Genewise1.C_4810030 X. tropicalis
JGI 4.1 e_gw1.481.30.1 X. tropicalis
JGI 4.1 e_gw1.481.31.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040622 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4810012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4810042 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4810030 X. tropicalis
JGI 4.1 e_gw1.481.137.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4810031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4810137 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_481000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_481000042 X. tropicalis
JGI 4.1 gw1.481.137.1 X. tropicalis
JGI 4.1 gw1.481.30.1 X. tropicalis
JGI 4.1 gw1.481.31.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7711135 BC127357 X. tropicalis NIH_XGC_tropInt1 intestine frog
NM_001097214 X. tropicalis
XM_012967799 X. tropicalis
XM_018230251 X. laevis.L
XM_018233774 X. laevis.S

ESTs (108)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7672674 CX882037 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAN11647 CX927671 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7847013 DT530953 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7541578 CX448117 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538696 CX451352 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6987842 CF220817 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:9014741 EL860930 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8913738 EL825953 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9016638 EL863736 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas132m03 AL965494 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383132 BQ394555 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu013h12 AL643325 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8954360 EL659380 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
TTbA012l06 CR412440 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA063p16 CR413793 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA071k03 CR423677 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA045p20 CR425601 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA056h08 CR446226 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA038c16 CR447703 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA006k02 CR576209 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA024b16 CR578591 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA044i24 CR583653 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr09C15 CN118708 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA012l06 BX707194 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA058c09 BX726898 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA048a19 BX727047 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025h10 BX734819 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7787516 CX330000 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594450 CX331541 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633950 CX375634 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611216 CX378357 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626486 CX379868 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626879 CX380208 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628338 CX382261 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628465 CX382686 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639591 CX385559 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598478 CX388252 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613915 CX389682 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4476 CX400483 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st14e09 DC166873 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8947451 EG656290 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7711135 CX967303 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7715839 CX975642 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7738537 DN026847 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7738330 DN027073 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7711135 CX967302 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7628465 DR900562 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7715839 CX975641 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA024b16 CR578592 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7738537 DN026846 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7628338 CX382260 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7738330 DN027072 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
xthr09C15 CN118707 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7847013 DT530952 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7787516 DR904681 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas132m03 BX761291 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7538696 CX451351 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA012l06 BX707195 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9014741 EL860931 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7639591 CX385558 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA058c09 BX726899 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8913738 EL825954 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst14e09 DC136804 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:9016638 EL863737 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA048a19 BX727048 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7672674 CX882036 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:5383132 BQ394554 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTpA025h10 BX734820 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7613915 CX389681 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594450 CX331540 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7027241 CF784523 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7541578 CX448116 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA012l06 CR412441 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7629555 CX368720 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA063p16 CR413794 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XZT4476 CX400482 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA071k03 CR423678 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7611216 CX378356 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN11647 CX927670 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7598478 DR891976 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA038c16 CR447704 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA006j07 CR567649 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7626879 CX380207 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA006k02 CR576210 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8642928 EB728516 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8641166 EB738951 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:4784030 BM262496 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6867930 CA981455 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3381673 BF047340 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
xl263m23 DC112893 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl269n11 DC114679 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl334i08 DC133404 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6940793 CD100964 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6939234 CD101096 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8821890 EG572618 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:6871845 CB196991 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:8735772 EE319346 5' X. laevis.L NICHD_XGC_panc pancreas frog
XL097j18 BJ073644 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl334i08 DC097375 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl269n11 DC079806 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8735772 EE315743 3' X. laevis.L NICHD_XGC_panc pancreas frog
XL097j18 BJ091589 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl263m23 DC078071 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk127o04ex DC011407 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3381673 BF049213 3' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:4784030 BM262168 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6871845 CB563230 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62