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Summary Expression Phenotypes Gene Literature (2) GO Terms () Nucleotides (187) Proteins (34) Interactants (72) Wiki
XB-GENEPAGE-6039679

Show:     All X. tropicalis X. laevis

Nucleotide sequences for capns1 - All

RefSeq mRNAs(3)
Models - Gene (28)
Models - mRNA (28)
mRNAs (6)
ESTs (105)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001428185 NM_001428185.1 NP_001415114.1 calpain, small subunit 1 1492 bp NP_001415114 X. tropicalis
NM_001094441 NM_001094441.1 calpain, small subunit 1 L homeolog 1578 bp NP_001087910 X. laevis.L
XM_041571824 XM_041571824.1 XP_041427758.1 calpain small subunit 1-like 2560 bp XP_041427758 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g32324 X. laevis.L
NCBI 10.0 XBXT10g020893 X. tropicalis
Xenbase 9.2 gene18638 X. laevis.S
Xenbase 9.2 gene37746 X. laevis.L
JGI 9.1 Xelaev18037936m.g X. laevis.S
JGI 9.1 Xelaev18004195m.g X. laevis.L
Xenbase 9.1 gene471 X. tropicalis
JGI 8.0 Xetrov14042770m.g X. tropicalis
JGI 7.2 Xelaev16068463m.g X. laevis.L
JGI 7.1 Xetro.K03610 X. tropicalis
JGI 6.0 XeXenL6RMv10022131m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009501 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_1100000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_11000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1100000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1100000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_11000008 X. tropicalis
JGI 4.1 e_gw1.1100.17.1 X. tropicalis
JGI 4.1 e_gw1.1100.40.1 X. tropicalis
JGI 4.1 e_gw1.1100.43.1 X. tropicalis
JGI 4.1 e_gw1.1100.44.1 X. tropicalis
JGI 4.1 gw1.1100.17.1 X. tropicalis
JGI 4.1 gw1.1100.40.1 X. tropicalis
JGI 4.1 gw1.1100.43.1 X. tropicalis
JGI 4.1 gw1.1100.44.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_11000017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_11000040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_11000043 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA60927 X. laevis.L
NCBI 10.0 rna001327 X. tropicalis
Xenbase 9.2 rna54416 X. laevis.S
Xenbase 9.2 rna78567 X. laevis.L
Xenbase 9.1 rna1459 X. tropicalis
JGI 9.1 Xelaev18037936m X. laevis.S
JGI 9.1 Xelaev18004195m X. laevis.L
JGI 8.0 Xetrov14042770m X. tropicalis
JGI 7.2 Xelaev16068463m X. laevis.L
JGI 7.1 Xetro.K03610.1 X. tropicalis
JGI 6.0 XeXenL6RMv10022131m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_1100000003 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_1100000003 X. tropicalis
JGI 4.1 gw1.1100.17.1 X. tropicalis
JGI 4.1 e_gw1.1100.17.1 X. tropicalis
JGI 4.1 gw1.1100.43.1 X. tropicalis
JGI 4.1 gw1.1100.44.1 X. tropicalis
JGI 4.1 gw1.1100.40.1 X. tropicalis
JGI 4.1 e_gw1.1100.40.1 X. tropicalis
JGI 4.1 e_gw1.1100.43.1 X. tropicalis
JGI 4.1 e_gw1.1100.44.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020964 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_11000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_11000003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_11000017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_11000040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_11000043 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1100000008 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:8961429 BC161772 X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
NM_001428185 X. tropicalis
XR_001923778 X. tropicalis
IMAGE:6957941 BC082462 X. laevis.L
NM_001094441 X. laevis.L
XM_041571824 X. laevis.S

ESTs (105)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6979225 CF149195 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977159 CF150094 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6979613 CF150214 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977159 CF223924 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6983390 CF226665 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:8961429 EL653377 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
st13k18 DC166683 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st9e21 DC175678 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st48a08 DC178562 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7524107 CX438464 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535330 CX476377 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6981497 CF222301 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7516714 CX748312 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:5383796 BQ396207 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6995472 CF239393 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu062l24 AL673708 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu133d22 AL789265 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA032j08 BX743380 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7600161 CX344807 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600520 CX363691 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602165 CX365519 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629225 CX368747 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633400 CX374718 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613933 CX389531 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609309 CX410621 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604779 CX411628 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7796846 DR884880 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7762759 DR887465 5' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
IMAGE:7762792 DR887623 5' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
IMAGE:7762999 DR887891 5' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
xtbs19P01 CN081555 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8871425 EL713669 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8910370 EL805930 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7667024 CX853496 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7668234 CX855559 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671296 CX879091 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672695 CX881524 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7800900 DR833945 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7756921 DR874257 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8928644 EL677378 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:9016727 EL863701 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA032j06 BX743379 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7762792 DR887622 3' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
TTpA032j08 BX743381 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7671296 CX879090 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7600520 CX363690 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7762999 DR887890 3' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
IMAGE:9016727 EL863702 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7535330 CX476376 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7800900 DR833944 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7668234 CX855558 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7762759 DR887464 3' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
IMAGE:6981497 CF222300 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7609309 CX410620 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8910370 EL805931 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8928644 EL677377 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7524107 CX438463 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7613933 DR896261 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5383796 BQ396206 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7796846 DR884879 3' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7975957 DR721863 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7976949 DR726221 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7983304 DR726589 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321905 DY546485 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8322266 DY549443 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318347 DY561738 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321653 DY561872 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:3548960 BF611877 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3550048 BG578015 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3581831 BG656832 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:4959547 BM180030 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4930532 BQ730810 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5516086 CF286208 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3400796 BG037466 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:8539832 EB463160 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8539396 EB483958 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGp998I218299 BX845278 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL468b06ex BP692300 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407k20ex BP696519 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL482o08ex BP697843 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL497d02ex BP709229 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8544788 EB470916 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
xl228l24 DC102282 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl247p06 DC108136 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl322f22 DC129707 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8527667 EB478815 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:7981025 DR714917 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7975981 DR718198 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7974718 DR719997 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7981602 DR724570 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8534213 EB476148 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL444e03ex BP683864 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3400796 BG020540 3' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:7983304 DR726568 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
rxl228l24 DC068206 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl236n24 DC070517 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl247p06 DC073649 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7981602 DR724582 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4084699 BI446928 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL444e03ex BP719892 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL468b06ex BP726627 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407k20ex BP730235 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL482o08ex BP731013 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL504d21ex BP735147 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5