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Summary Expression Phenotypes Gene Literature (5) GO Terms (11) Nucleotides (211) Proteins (49) Interactants (58) Wiki
XB-GENEPAGE-986637

Show:     All X. tropicalis X. laevis

Nucleotide sequences for msh6 - All

RefSeq mRNAs(2)
Models - Gene (30)
Models - mRNA (37)
mRNAs (5)
ESTs (111)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
XM_002935375 DNA mismatch repair protein Msh6 4354 bp XP_002935421 X. tropicalis
NM_001095778 NM_001095778.1 mutS homolog 6 L homeolog 4195 bp NP_001089247 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g22541 X. laevis.L
NCBI 10.0 XBXT10g010851 X. tropicalis
ENSEMBL 10.0 msh6 X. tropicalis
Xenbase 9.2 gene9176 X. laevis.L
JGI 9.1 Xelaev18026119m.g X. laevis.L
Xenbase 9.1 gene3879 X. tropicalis
ENSEMBL 9.1 msh6 X. tropicalis
JGI 8.0 Xetrov14024187m.g X. tropicalis
JGI 7.2 Xelaev16000893m.g X. laevis.L
JGI 7.1 Xetro.E01484 X. tropicalis
JGI 6.0 XeXenL6RMv10032020m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022635 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1470029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1470030 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1470007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_147000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_147000029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_147000030 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_147000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1470003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1470057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1470028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1470021 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1470016 X. tropicalis
JGI 4.1 e_gw1.147.28.1 X. tropicalis
JGI 4.1 e_gw1.147.21.1 X. tropicalis
JGI 4.1 gw1.147.60.1 X. tropicalis
JGI 4.1 gw1.147.28.1 X. tropicalis
JGI 4.1 gw1.147.21.1 X. tropicalis
JGI 4.1 e_gw1.147.60.1 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA42017 X. laevis.L
ENSEMBL 10.0 ENSXETT00000113337 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109820 X. tropicalis
NCBI 10.0 mRNA053774 X. tropicalis
ENSEMBL 10.0 ENSXETT00000049000 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083464 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065397 X. tropicalis
Xenbase 9.2 rna26665 X. laevis.L
Xenbase 9.1 rna12660 X. tropicalis
ENSEMBL 9.1 ENSXETT00000049000 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065397 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083464 X. tropicalis
JGI 9.1 Xelaev18026119m X. laevis.L
JGI 8.0 Xetrov14024187m X. tropicalis
JGI 7.2 Xelaev16000893m X. laevis.L
JGI 7.1 Xetro.E01484.2 X. tropicalis
JGI 7.1 Xetro.E01484.1 X. tropicalis
JGI 6.0 XeXenL6RMv10032020m X. laevis.L
JGI 4.1 gw1.147.60.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1470028 X. tropicalis
JGI 4.1 e_gw1.147.28.1 X. tropicalis
JGI 4.1 e_gw1.147.60.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049000 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1470003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1470029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1470030 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1470007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1470016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1470021 X. tropicalis
JGI 4.1 e_gw1.147.21.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1470057 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_147000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_147000029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_147000030 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_147000007 X. tropicalis
JGI 4.1 gw1.147.21.1 X. tropicalis
JGI 4.1 gw1.147.28.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7693503 BC161405 X. tropicalis NIH_XGC_tropTe4 testis frog
XM_002935375 X. tropicalis
IMAGE:6871244 BC089270 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
LC075520 X. laevis.L
NM_001095778 X. laevis.L

ESTs (111)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas135p10 AL958154 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060c23 AL681704 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7619175 CX346089 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7572772 CX436293 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas071b01 AL773687 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7544220 CX460448 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7693503 CX920546 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7561419 CX464446 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8863460 EL699776 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7564227 CX474241 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st25l21 DC170436 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7564831 CX475422 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530243 CX419391 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536174 CX477265 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7689973 CX913940 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7546858 CX500514 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531467 CX420966 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559438 CX514862 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu070m16 AL782277 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7560611 CX516343 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8886791 EL844158 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8959105 EL653439 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7639215 CX385039 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8943944 EG653256 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8961293 EL654576 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7694276 CX922368 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7706946 CX959465 5' X. tropicalis NIH_XGC_tropTe5 testis frog
THdA039m06 CR574934 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7619348 CX347033 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA039m05 CR580556 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas071l06 AL773906 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA005f13 BX707293 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7706946 CX959464 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694276 CX922367 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693503 CX920545 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689973 CX913939 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8863460 EL699775 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7639215 CX385038 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas060c23 BX747687 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136k18 BX759798 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135p10 BX761335 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst25l21 DC140274 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7531467 CX420965 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572772 CX436292 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7619348 CX347032 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA039m06 CR574935 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA039m05 CR580557 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA065o15 BX727017 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7619175 CX346088 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7544220 CX460447 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561419 CX464445 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564227 CX474240 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564831 CX475421 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536174 CX477264 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546858 CX500513 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559438 CX514861 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560611 CX516342 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8886791 EL844159 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL075k07 BJ062314 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3473006 BI444683 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:8640365 EB734971 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0045F05 AW636348 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0120F01 AW642700 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0159B11 AW646037 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6871244 CA983619 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3381187 BF048278 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:7299589 CO387452 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6866119 CA793956 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6866315 CA794059 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863696 CA987125 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL146l10 BJ094817 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL185o21 BJ618642 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL209g21 BJ624738 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3748056 BE681145 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL470k18ex BP693471 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL472k07ex BP697175 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL500o05ex BP701253 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL497n11ex BP709430 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498n11ex BP709712 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk152a01ex DC052350 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3516101 BG017005 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGp998N068574 BX852811 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
xl231b13 DC102997 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl235f18 DC104277 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl254b17 DC109996 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl288l23 DC119974 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl292n19 DC121107 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl311e01 DC126403 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl311n10 DC126582 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl338o21 DC134601 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8321701 DY553323 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318197 DY571208 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
AW765352 AW765352 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
AW782370 AW782370 3' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
rxl338o21 DC098512 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl292n19 DC086322 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl288l23 DC085209 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl254b17 DC075371 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl235f18 DC070073 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl231b13 DC068894 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk152a01ex DC018996 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL498n11ex BP741553 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL497n11ex BP741299 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL501p05ex BP734531 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL500o05ex BP734223 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL472k07ex BP728158 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3748056 BF025578 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL209g21 BJ641250 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3401172 BE575501 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3381187 BF049016 3' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9