|
XB-GENEPAGE-988693
Nucleotide sequences for prpf40a - All
| RefSeq mRNAs(13) |
| Models - Gene (34) |
| Models - mRNA (50) |
| mRNAs (32) |
| ESTs (224) |
RefSeq mRNAs (13)
| Accession | Version | Protein Name | Length | Protein | Species |
|
NM_001256940
|
NM_001256940.1 | pre-mRNA-processing factor 40 homolog A isoform 1 | 3738 bp | NP_001243869 | X. tropicalis |
|
NM_001256941
|
NM_001256941.1 | pre-mRNA-processing factor 40 homolog A isoform 2 | 3723 bp | NP_001243870 | X. tropicalis |
|
XM_018097048
|
XM_018097048.1 | pre-mRNA-processing factor 40 homolog A isoform X1 | 3713 bp | XP_017952537 | X. tropicalis |
|
XM_018097049
|
XM_018097049.1 | pre-mRNA-processing factor 40 homolog A isoform X2 | 3681 bp | XP_017952538 | X. tropicalis |
|
XM_018097050
|
XM_018097050.1 | pre-mRNA-processing factor 40 homolog A isoform X3 | 3683 bp | XP_017952539 | X. tropicalis |
|
XM_018097051
|
XM_018097051.1 | pre-mRNA-processing factor 40 homolog A isoform X4 | 3651 bp | XP_017952540 | X. tropicalis |
|
XM_018233940
|
XM_018233940.2 | pre-mRNA-processing factor 40 homolog A isoform X1 | 3187 bp | XP_018089429 | X. laevis.L |
|
XM_018233941
|
XM_018233941.2 | pre-mRNA-processing factor 40 homolog A isoform X2 | 3274 bp | XP_018089430 | X. laevis.L |
|
XM_018233942
|
XM_018233942.2 | pre-mRNA-processing factor 40 homolog A isoform X3 | 3271 bp | XP_018089431 | X. laevis.L |
|
XM_018233944
|
XM_018233944.2 | pre-mRNA-processing factor 40 homolog A isoform X4 | 3281 bp | XP_018089433 | X. laevis.L |
|
XM_041577112
|
XM_041577112.1 | XP_041433046.1 pre-mRNA-processing factor 40 homolog A isoform X4 | 3277 bp | XP_041433046 | X. laevis.L |
|
XM_041577113
|
XM_041577113.1 | XP_041433047.1 pre-mRNA-processing factor 40 homolog A isoform X5 | 3267 bp | XP_041433047 | X. laevis.L |
|
XM_018238784
|
XM_018238784.2 | pre-mRNA-processing factor 40 homolog A | 3894 bp | XP_018094273 | X. laevis.S |
Models - Gene (34)
| Source | Version | Model | Species |
| NCBI | 10.1 |
XBXL10_1g43433
|
X. laevis.S |
| NCBI | 10.1 |
XBXL10_1g40602
|
X. laevis.L |
| NCBI | 10.0 |
XBXT10g001834
|
X. tropicalis |
| ENSEMBL | 10.0 |
ENSXETG00000021713
|
X. tropicalis |
| Xenbase | 9.2 |
gene12425
|
X. laevis.L |
| Xenbase | 9.2 |
gene1879
|
X. laevis.S |
| Xenbase | 9.1 |
gene25005
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETG00000021713
|
X. tropicalis |
| JGI | 8.0 |
Xetrov14037042m.g
|
X. tropicalis |
| JGI | 7.2 |
Xelaev16028016m.g
|
X. laevis.L |
| JGI | 7.2 |
Xelaev16053202m.g
|
X. laevis.S |
| JGI | 7.1 |
Xetro.I00226
|
X. tropicalis |
| JGI | 6.0 |
XeXenL6RMv10031527m.g
|
X. laevis.L |
| JGI | 6.0 |
XeXenL6RMv10013405m.g
|
X. laevis.S |
| JGI | 6.0 |
XeXenL6RMv10042991m.g
|
X. laevis.S |
| ENSEMBL | 4.1 |
ENSXETG00000021713
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_pg.C_scaffold_227000009
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_pg.C_scaffold_227000010
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_pm.C_scaffold_227000002
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_kg.C_scaffold_227000004
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_pm.C_2270002
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_pg.C_2270010
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_pg.C_2270009
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_kg.C_2270004
|
X. tropicalis |
| JGI | 4.1 |
estExt_Genewise1.C_2270131
|
X. tropicalis |
| JGI | 4.1 |
estExt_Genewise1.C_2270130
|
X. tropicalis |
| JGI | 4.1 |
estExt_Genewise1.C_2270028
|
X. tropicalis |
| JGI | 4.1 |
estExt_FilteredModels1.C_2270006
|
X. tropicalis |
| JGI | 4.1 |
gw1.227.28.1
|
X. tropicalis |
| JGI | 4.1 |
gw1.227.131.1
|
X. tropicalis |
| JGI | 4.1 |
gw1.227.130.1
|
X. tropicalis |
| JGI | 4.1 |
e_gw1.227.131.1
|
X. tropicalis |
| JGI | 4.1 |
e_gw1.227.130.1
|
X. tropicalis |
| JGI | 4.1 |
e_gw1.227.28.1
|
X. tropicalis |
mRNAs based on gene models(50)
| Source | Version | Model | Species |
| NCBI | 10.1 |
XBmRNA76407
|
X. laevis.L |
| NCBI | 10.1 |
XBmRNA81689
|
X. laevis.S |
| ENSEMBL | 10.0 |
ENSXETT00000092772
|
X. tropicalis |
| ENSEMBL | 10.0 |
ENSXETT00000075585
|
X. tropicalis |
| NCBI | 10.0 |
mRNA009275
|
X. tropicalis |
| ENSEMBL | 10.0 |
ENSXETT00000068156
|
X. tropicalis |
| ENSEMBL | 10.0 |
ENSXETT00000046954
|
X. tropicalis |
| ENSEMBL | 10.0 |
ENSXETT00000100720
|
X. tropicalis |
| Xenbase | 9.2 |
rna5488
|
X. laevis.S |
| Xenbase | 9.2 |
rna36122
|
X. laevis.L |
| ENSEMBL | 9.1 |
ENSXETT00000062880
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000068156
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000070300
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000046954
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000075585
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000046959
|
X. tropicalis |
| Xenbase | 9.1 |
rna49637
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000092772
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000100720
|
X. tropicalis |
| ENSEMBL | 9.1 |
ENSXETT00000077838
|
X. tropicalis |
| JGI | 8.0 |
Xetrov14037042m
|
X. tropicalis |
| JGI | 7.2 |
Xelaev16053202m
|
X. laevis.S |
| JGI | 7.2 |
Xelaev16028016m
|
X. laevis.L |
| JGI | 7.1 |
Xetro.I00226.4
|
X. tropicalis |
| JGI | 7.1 |
Xetro.I00226.3
|
X. tropicalis |
| JGI | 7.1 |
Xetro.I00226.2
|
X. tropicalis |
| JGI | 7.1 |
Xetro.I00226.1
|
X. tropicalis |
| JGI | 6.0 |
XeXenL6RMv10042991m
|
X. laevis.S |
| JGI | 6.0 |
XeXenL6RMv10013405m
|
X. laevis.S |
| JGI | 6.0 |
XeXenL6RMv10031527m
|
X. laevis.L |
| JGI | 4.1 |
gw1.227.130.1
|
X. tropicalis |
| JGI | 4.1 |
e_gw1.227.131.1
|
X. tropicalis |
| JGI | 4.1 |
e_gw1.227.28.1
|
X. tropicalis |
| ENSEMBL | 4.1 |
ENSXETT00000046954
|
X. tropicalis |
| ENSEMBL | 4.1 |
ENSXETT00000046959
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_kg.C_2270004
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_pg.C_2270009
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_pg.C_2270010
|
X. tropicalis |
| JGI | 4.1 |
estExt_fgenesh1_pm.C_2270002
|
X. tropicalis |
| JGI | 4.1 |
estExt_FilteredModels1.C_2270006
|
X. tropicalis |
| JGI | 4.1 |
estExt_Genewise1.C_2270028
|
X. tropicalis |
| JGI | 4.1 |
estExt_Genewise1.C_2270130
|
X. tropicalis |
| JGI | 4.1 |
estExt_Genewise1.C_2270131
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_kg.C_scaffold_227000004
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_pg.C_scaffold_227000009
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_pg.C_scaffold_227000010
|
X. tropicalis |
| JGI | 4.1 |
fgenesh1_pm.C_scaffold_227000002
|
X. tropicalis |
| JGI | 4.1 |
e_gw1.227.130.1
|
X. tropicalis |
| JGI | 4.1 |
gw1.227.131.1
|
X. tropicalis |
| JGI | 4.1 |
gw1.227.28.1
|
X. tropicalis |
mRNAs from cDNA libraries (32)
| Clone | Accession | Species | Library | Anatomy | Stage |
|
AL803991
|
X. tropicalis | ||||
|
AL847021
|
X. tropicalis | ||||
|
AL967437
|
X. tropicalis | ||||
| IMAGE:7864585 |
BC155432
|
X. tropicalis | |||
| IMAGE:7564990 |
BC167341
|
X. tropicalis | NIH_XGC_tropGas7 | whole organism | NF stage 10.5 to NF stage 12.5 |
|
CX418845
|
X. tropicalis | ||||
|
CX426510
|
X. tropicalis | ||||
|
CX431318
|
X. tropicalis | ||||
|
CX442477
|
X. tropicalis | ||||
|
CX474725
|
X. tropicalis | ||||
|
CX515333
|
X. tropicalis | ||||
|
DN097242
|
X. tropicalis | ||||
|
DR854637
|
X. tropicalis | ||||
|
EL667158
|
X. tropicalis | ||||
|
EL838243
|
X. tropicalis | ||||
|
NM_001256940
|
X. tropicalis | ||||
|
NM_001256941
|
X. tropicalis | ||||
|
XM_018097048
|
X. tropicalis | ||||
|
XM_018097049
|
X. tropicalis | ||||
|
XM_018097050
|
X. tropicalis | ||||
|
XM_018097051
|
X. tropicalis | ||||
| IMAGE:4888679 |
BC124939
|
X. laevis.L | NICHD_XGC_Emb2 | whole organism | NF stage 17 to NF stage 19 |
|
NM_001127820
|
X. laevis.L | ||||
|
XM_018233940
|
X. laevis.L | ||||
|
XM_018233941
|
X. laevis.L | ||||
|
XM_018233942
|
X. laevis.L | ||||
|
XM_018233944
|
X. laevis.L | ||||
|
XM_041577112
|
X. laevis.L | ||||
|
XM_041577113
|
X. laevis.L | ||||
| IMAGE:5073954 |
BC130103
|
X. laevis.S | |||
| IMAGE:5073208 |
BC157397
|
X. laevis.S | |||
|
XM_018238784
|
X. laevis.S |
