XB-CLONE-3094418
Clone Name: IMAGE:7880430
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Gene:
znf516
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC128653
[+]
CCTGTTTGTCTGTGTCCTCAATAAATGAATAAATTATATATATTCTGCAGTGCAAGCAATCTAGCGTTGCTAATCCATGCTTTGGATCAGCTGAAGCTTC
CGAGGAGTGTTCATGAAATGGAGAAAGAAATCATCATGACGTCTGCTCAGACCTAAGGTATCCATCTTCAGCTTGTTGGCATAGATCTGTGAAGGTCATC
ACTTCTGGAGTTATGCTGGATAATAGATTGTCACTGAAAACACAACTGTCCTACCAACTCCTACTGGATTGAGTTTAGTCATTTTCCCTCTGACCTGACT
AATGTTTTGCTGATTATGGAACGTAGGAAACAATTTGACATGTCACTACGTGAGTCCTCTGCAAAGTCAGGCAAAAATGATACAGAAGAAGACAAAGGAT
CAGGCTTCAGCTGTGTCATCTGTGGTAAAAGCTTTCCTTTCCAGAGCTCCCTTTCACAACACATGCGAAAGCACACTGGTGAAAAGCCATACAAATGTCC
TTACTGCGATCATCGGGCTGCCCAGAAAGGAAACTTGAAAATACATCTAAGAACCCATAGAAGTGGCACAATTAACCAGGTAACTGATATGGAAATGGGA
GATTTACACGTTGGAGAATTTGGTGCTTCTGAGGGCATGGGAGGTTGTGCAAGCCCTACTAAAAGCACATCAGCTTGCAACAAAATACTTAATGGCACCT
TACAAACAGAAGAGGCTGAAGAAGTGGATGATGACCAACTCGGCAACTTCCAGTGCCCATTTTGCAAAAACAAATATGACCGAAAGAAAGAACTTGATCA
ACATCTTTTACAAGTGCACAAACCCTATAAATGTAGATTTTGTAGCTACATGACTTTAAGAGAGGAGACTCTGTTAAATCATATAGAAAAAGACCATATC
ACTACAGCTGTACCATTGAACAGAGATGGTCTGGCAGAGAATGGCAAGACTGAAATCAATTCAGGGGAGTTCCCTTGTGAAGTTTGTGGTCAAGCTTTTG
GCCAAGCATGGTTCCTTAAAGCTCATATGAAAAAGCACCGAGGATCATTTGATCATGGCTGCCATATATGTGGTAGAAGATTTAAAGAGCCATGGTTTCT
CAAGAACCACATGAAGTCTCATGGTCCAAAAACTGGGAACAAAAACAAACCTAAGTCTGACTCTGAGCCAGTAGCTACTATTAATGATGTTGTTCAAGAA
GAGACCATTATGACTGGCTTAAGCCTTTATGAAGTTTGCATGAAATGTGGGAATTTGTTTACAAATTTAGAAAGCCTAAATGCACACAACTTAGTGCACT
GTAAAACTGAAGAAATCTCTCTTGAAGACCCAATAGAGCAAAATAGAGAAAATGACACCCCAAATTCAATGGGGGCTAAGCAGTTTTTACTTGACTATCT
TCATTTAAGACCTTTAAAAGATGCTAATAAGCCTTCCGATATACAACAAGGTAAAAGAGTTCCAGAACTTGACCCAATCAACAGCTACCAAGCATGGCAA
TTGGCTACAAAAGGAAAAGTTGCAGAGCCCTCAGAATATGTTAAATATCTGGGATGGGATGAAACCATGGCAGATGCTGATGTAACTTATGATAAAGACA
AAGGAGAATACATCCTTGTTAATCAGGAGAAGCGAAAACGAGAGCCAGACAGTCAAAGTACCAGCAACCCAAAGAAACGCAACTCCTCAAGTGTTAGCCG
ATCGGAAAAGAGTAGCAATACACAATCGGGAGAAAATGTAGATGGTTCCAATGAATTGGAGTTTAGGCCTCCTTCTCGTCAGAGCAGGCGTTCCTCTCAA
AATAAATCCACTGAATGCTTTGAATGTGGAAAAGTGTTCCGCACTTACCATCAAATGGTGCTTCATTCCAGGGTGCATAGAAAAGACCGCAGGAGCCTCA
GTGAAAGTGGGTCGGTTTCTCACAATGATCGATATGGGTCAAACAGTGACATTGACTCTGCCAGCCGGCCCAGTAGTCCAGACTCTGCCTCTGCCCCAGA
AGATTCTCTTGCCTCTGGTATGGGAGAAGATGCTGCTGATGACGACAGTTTTGAAGAAGGTCCGACTCCTTCACCAGGCATTAAACCATACCATCTTACA
TTTTCTGAGGGTGTACCCATGGAAATGTCAGTAAATCATCAACAGAACTTCACTTCTGATGATACCAGCAAATGTGAAGGAAGTAAATGTATTCCAGAGG
TGCAGACTCCTCCAGCCTTCATATCTAATAAGCATGCTGATTTTCCTTTTATCCCTGATTTGAAAATACCAGCATTCAAGTACAATCAAGATCCCAGTGC
TTCTGGAAAGCATACCCCGAACAGTAGTTCATCTTTTTCTGTGGGACATAGTTCAGAAGTAATTGTGGATGCAAAAAAAGTTTTTTCAGCAGAAAAGGGT
CACCCAAATGGAATGGCACTTGATATGCTGAAGGAACACAGTGGGTCAGATAAAAGCAGTGGTGGAAAACACGACCTTCCTTTGGATCTTAGTGAAAAAT
CTACTAGGCATGAACTTTGTAGTAAAAGTGCTATTTCTGCATTGCAGGCAGCGTTGGTGGTTCACCAGTGTCCATATTGCAGCCACAATACTTATTATCC
TGAGGTGCTGTGGATGCACAAAAGAATTTGGCATAAAGTTAGTTGTAATTCAATGGCTCCTCAATGGATTCAGCAAAATGGTTTCAAAAATTTGAAAAAT
AATTTGCTTTTCCTAACTAGGAGTGGGCGTACAGGTCCGCCTCCAGCACTTGGTGGTAAAGAATGTCAGCCTTTACCCATAGCTAGGTTCTCACGCACTC
AAATGCCAATTCGGCCTCCAACATCCAAAGGAAATACTGCAAATCTAAGCAGTGTTTCCAAGGCAGCATGTGGATCTCAGGTTCGTGACAGCCCTCATGG
ATTCAGTGGGGCGAAAACCACAAACTTTGAAGTCCAGAGGCACCAAAAGGTAGGGGACCAATATAGTGCTGCTGTACAGCAACCATTGTTAAAATCTAAA
TATGAAACTAGTCCAAAATTGATGCAAGCTGCAAGTTTCAGTAGAAACCTTTCACCTGCTCAAGCATCAGTATCAAGACAAATACTTCAGCCCTCTAGTA
GCAAACAAGTGGAGAAATACGGGATGCCTCAAGGTGGACCTAGTACATTTGCATCTCCGAGTAAACTATCTGTATCTGACACAATTAAAACCAAATTTCC
TCTTCAGCAGCCACAGTACCCATTTCACAAAGTGGAGCCACAAGTTAAACAGGAGAGTCCTCCAGTGCCTCACCGGGAATCTCAGGGCAAGATTGTCAAT
GAACTAGGGACAGTGTCCAACTGTAGCACAGGCATGAAGACAAGCCCTTTGTTTCATTCTCAACCAAGTACAGCAGGTGACCCCCAATCTTTTCAACCGG
TCAAGCAAGAACCAGTATCTGAAGGCCATGAAAAACGACTGGACATTTTAAATATCTTTAAGACCTACATTCCAAAGGATCTTGCTACTCTCTACCAAAG
CTGGGGTGCCAACGCTAATAATTTGGATAATGCAGGAATGCTTAGGACACAAGCACGGCAAGGAGACTATGTTTGCAATGAGTGCGGAAAATGTTTCAGC
CAACCAAGCCACTTAAGAACCCATATGAGGTCCCATACAGGGGAGAGACCATTCCAGTGCAGATATTGTCCATACAGTGCCTCTCAAAAAGGGAACCTAA
AAACACACGTACAGTGTGTACATCGGGTACCATTTGACAATAGTGAGTACCCTGACAAACAGCTCCTTCAACCTCAAAGCGATGATAACAGTTACATGGA
CGATCAGCTGGAAAATTTGCCTTCAAATCACCAAGTCCCTGGAGCTGTGGCGTTAAAGTAAAGAAGGAGAAATAACAATCCACAATCAAATTCCCCCTCA
GCAGGGGTCGATCTTAACTTCTTAGCATTTTCTTATTAGACAAGATGTGAGTGAAAATGCATCTGGTCTTCCCCCATGGTTCAGTGTTTGCCGGATAATG
AACTATGGCAAAGTTTGAGATGGCAAAAGACAGTCAATAGTGAAGCAGATACTTGTCTCACACACGCAACACCACATACAAACACACACACTGGAAGCAT
AACAAAATGTTAAAAGCTTACAAGTGCAAGCACTGATATTATATCTACGCTATGAACTGCAGCAGTAGAAAAAAGGACTAAGAAAAAACAACACAACTCT
GCCACTGATTGCCTAATGTCAGACTGCTCAGTGACGTTACTCAGTAATAGGCATCGGTCAGCTCTTGGGACCGCTCCGTGTTTTAAATGGTCTTCTGTTT
TTTTAATGATCAAACGATGCTTCACACCTTGCTGCGCTGTTTTTGGGGACACAGATAAGATCAATGAAACCGCTTACATTATGCTACAGGAACACTAAAA
AGAAAAACAAAAAAAAAAATCTAAAAATGCTTCTCCTTTTTACTCTCAGGACCTTTTTGTAATAGGGCTACTTTCTTAAACCTGCTTACAGAAATTATGC
AATTTTGTTTTCCTTTGTAATAACCTAAACACACATCAGCTGCCGATTGACGTACTGTACTAGACACAACATAGTTGCTGTGCATGATGTAGCAGGGACA
CCCGATCTTCTTTCCCTGTTGCACAACCACCCTTCTCAATGCCGGTACCTTGAGAGAGGTCTTAATATTTTTTTAATTTTCCAGGTTATGGCATGGTAAT
AGAATTTCTTACTACTTCATCTCTTATATTTTGGTGGCATTCAGGTTGTGGGAGAGAGGGGGAAAAAGATTTAAAAAAAATCTATATATAAATATATATA
TATATATATATAAAATTAAATATATACCTCTTCTGCAGGATATTTTTATGGTGAGGTGGTGGTGAGTAAAATAAATGAGAAATCAAGCAGTGTACTTAAT
TCTAACCCCATACACTGTAGCAGGGCGGGCTTGAACTGCACTGTACAGGCAGGGGGGATACATATGTATTCCATAGATATAAATATTTCTTTCCTTTATT
GCGGTGACACTGTGTGGAACAGCAATGCCTCTGAGAGTCTCAAATTTTGCACATATGATTTTATGCATTATCAACCAAGTTACTGCTGCCTTGAAAGAAA
ATGTTCTGTGAAAAAAAAATTGCAAAAAGCTTTACTAGTGTTTTTTTTAATTGTAACCTTTTGTAAAGGCAGGAAATGGGTATATAAATCCTAGCATGCT
AAATATATTTTTCAAAAAAAAAAAAAAAAAA
5' EST: DT443415
[+]cctgtttgtctgtgtcctcaataaatgaataaattatatatattctgcagtgcaagcaatctagcgttgctaatccatgctttggatcagctgaagcttc
cgaggagtgttcatgaaatggagaaagaaatcatcatgacgtctgctcagacctaaggtatccatcttcagcttgttggcatagatctgtgaaggtcatc
acttctggagttatgctggataatagattgtcactgaaaacacaactgtcctaccaactcctactggattgagtttagtcattttccctctgacctgact
aatgttttgctgattatggaacgtaggaaacaatttgacatgtcactacgtgagtcctctgcaaagtcaggcaaaaatgatacagaagaagacaaaggat
caggcttcagctgtgtcatctgtggtaaaagctttcctttccagagctccctttcacaacacatgcgaaagcacactggtgaaaagccatacaaatgtcc
ttactgcgatcatcgggctgcccagaaaggaaacttgaaaatacatctaagaacccatagaagtggcacaattaaccaggtaactgatatggaaatggga
gatttacacgttggagaatttggtgcttctgagggcatgggaggttgtgcaagccctactaaaagcacatcagcttgcaacanaatacttaatggcacct
tacanacagaagaggctgaagaagtggatgatgaccaactcggcaacttccagtgcccattttgcaaaaacaaatatgac
3' EST: DT443414
[+]gaaaaatatatttagcatgctaggatttatatacccatttcctgcctttacaaaaggttacaattaaaaaaaacactagtaaagctttttgcaatttttt
tttcacagaacattttctttcaaggcagcagtaacttggttgataatgcataaaatcatatgtgcaaaatttgagactctcagaggcattgctgttccac
acagtgtcaccgcaataaaggaaagaaatatttatatctatggaatacatatgtatcccccctgcctgtacagtgcagttcaagcccgccctgctacagt
gtatggggttagaattaagtacactgcttgatttctcatttattttactcaccaccacctcaccataaaaatatcctgcagaagaggtatatatttaatt
ttatatatatatatatatatatttatatatagattttttttaaatctttttccccctctctcccacaacctgaatgccaccaaaatataagagatgaagt
agtaagaaattctattaccatgccataacctggaaaattaaaaaaatattaagacctctctcaaggtaccggcattgagaagggtggttgtgcaacaggg
aaagaagatcgggtgtccctgctacatcatgcacagcaactatgttgtgtctagtacagtacgtcaatcggcagctgatgtgtgtttaggttattacaaa
ggaaaacaaaattgcataatttctgtaagcaggtttaagaaagtagccctattacaaaaaggtcctgagagtaaaaaggagaagcatttttagatttttt
tttttgtttttcttt
Library:
Description: The library was prepared from total RNA by oligo-dT priming (5'- ACTAGTGCGGCCGCCTAGGCCTCGAGTTTTTTTTTTTTTTTTTTV-3') and Stratascript reverse transcriptase. After ligation of EcoRI adapters (5'-AATTCGGCACGAGG-3') followed by kinasing adapters and by XhoI digestion, the cDNA was size selected by chromatography on Sepharose CL-2B columns and fractions containing cDNAs larger than 1000 bp were ligated into EcoRI/XhoI-digested pCS107. Average insert size 1610 bp. Reference for library construction: Current Genomics 4, 635-644. Library constructed by Michelle Tabb and Bruce Blumberg (Dept of Developmental and Cell Biology, University of California, Irvine).Anatomy: spleen | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCS107
Type: plasmid
5' Restriction Site: EcoRI
3' Restriction Site: XhoI |  |
Usage:
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