XB-CLONE-3281370
Clone Name: IMAGE:7676555
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Gene:
ttc39c
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC155687
[+]
AGCCCGAGTGCTGTCAGCCGGCGGGGAGATAACAAAGGGCGCAGGGGGCTCCTCCTATAGCGGGGGCTGTCACTGGCTCACACGTACCGGCACAACGAGC
GCATCCACCGAGAGCCTGTGCCAGCCCCTGCACCATGGCCGAGCAGCACCTCCACACGCAGGGCAAAGCAGAACCGCTGGATCCCTCAGAGGATGCGGAA
CTGGCGCTGGTGGGGATCAATATGCTCTTGAATAATGGCTTCAAAGAGTCCGACCAGCTGTTCAGGAAATACAGGAATAACAGTCCACTGATGAGCTTTG
GTGCCAGTTTTGTCAGCTTTTTGAATGCTATGATGACTTTCGAAGAAGAAAAAATGCAGTTGGCATGCGATGATTTAAAAATGACTGAAAAACTGTGTGA
AAGTGACGAAGGCGTCATAGAAACCATAAAGAATAAAATCAAGAAAAATGTTGACATTAGAAAGTCTTCTCAGTCCATGGTTGATCGGCTGCAGAGACAG
ATAATTGTGGCAGACTGCCAGGTTTACATTGCGGTACTGTCCTTTGTTAAGCAAGAACTGTCAGCTTATATAAAAGGTGGGTGGATCCTGCGAAAAGCCT
GGAAAATATACAACAAGTGCTATGTGGATATAAATGCCCTTCAGGAAATGTATCAGAAGAAGACATCTCAGGAGTCTGATGCTGCAAACGATAATCACAT
TGACGCTGAAGGTGTCACGGAGGATTCTCTTAACAGGCTGAAAGGTGCTGTGAGCTTTGGCTACGGACTTTTTCACCTTTGCATATCCATGGTGCCCCCA
AACCTGCTCAAAATCATCAACTTGCTGGGTTTTCCGGGAGACCGTCTGCAGGGGCTTTCTTCACTGATGTATGCAAGTGAAAGTAAGGACATGAAGGCCC
CTTTAGCTACGTTGGCATTGCTATGGTACCATACTGTAGTACGCCCATTCTTTGCACTGGATGGCAGTGATAACCAAGGTGGACTGAAAGAGGCCAAAGA
GATTCTTAACAAGAAGGAATCAGCCTATCCCAACTCTTCTTTATTTATGTTCTTTAAGGGAAGAATACAGCGATTAGAGTGTCAAATAAACAGTGCCTTG
ACTTCTTTTCACACCGCTCTGGAACTGGCAACAGACCAGAGGGAGATCCAGCATGTTTGTCTATATGAAATAGGTTGGTGCAGCATGATAGAAATGAACT
ATAAGGATGCCTTCCAATCCTTTGAGAGACTGAAGAACGAATCGCGATGGTCCCAGTGCTACTATGCTTATCTGACCGCAGTGTGTCAGGGGGCCACCGG
GGATGTGGATGGAGCACATGATGTATTTAAAGACGTCCAGAAACTTTTCAAACGGAAGAACAACCAGATTGAGCAATTCTCTGTTAAGAAGAGTGAACGA
TTTAAAAAACAAAGCCCAACCAAAGAGCTGTGTGTTCTGGCTGCTATTGAGGTGCTGTATCTGTGGAAGGCTCTTCCCAACTGTTCTCTCTCTAACCTCC
AGCGCATGAGCCAAGCTTGCCATGAAGTGCTGGATCCAGCTGTTGTGGGTCTGAGGAGTTTGCTCCTTGGTGCTATACATAAATGCCTCGGGAACACTGA
AGATGCCGTTCAGTTTTTCCAGCGCGCAGTTAAAGATGAAATAGGTCGTCAGCAGAACCTGTATGTGCAGCCATATGCTTGTTATGAACTGGGCTGCCTA
TTATTGGACAATCCAGAGACTGTGGTGAAGGGGAAAACATTGCTTTTTCAGGCAAAGGAAGAATATACCGGCTATGATTTTGAGAACAGATTGCACGTGC
GGATCCATGCAGCCTTAGCCTCTCTCAGAGAAGTGGTCCCGCAGTGATGCAGTGTGTGTCTGACACTGGTTTCTACACTGGTTTCTGCACTTTAATCAGA
AGCAGAGGATCAAAAACACTGGGCAAAATGGTGGATTCTGCATTGTTCCAAAAAACGACCTGTGCCAGACAAAATGCACAGAACTGGCACCATTTGCCTG
AAATGGAATTCAGTTTTTTTATTTAAAAATACAAACAAACAAACCCTGGGGAGGGAACCATGTAATATATTATATTCCCTCTTCTGGGTTGGCAGACATG
TAGTTTGGCAGCTGCTGTGCTATTCAGGGGCACATTAGTGCTGATCAGTAGTTCCACCTACTGGACACACTATAGAACTGTATAAGCACTCCTTTTATGT
AACCTTACTGACAGACACCATTAAATGTAAGGGGATAATGTTCACCTTAGTAGATATTGCTGCTCTGCTTACATTTGCTGGATGTGATTCCGCCAAGGAA
CACTGTACCAAAATGATATTGGCAAGAAGTGCTTAATGCAGTCGCATACACTGAATTGCTGCTAGGAAATTCCCAGTAGAAAGGGGCACTGGTTATGCAG
CTAGGACTTAGGATACACACACAATGCCACAGTGTCCTTTAATTTCAGCACAACCCATGCTACCATCTTGTATTGTCAGGTCTCACTAACATGTAGATGG
GAGCACTGGAAGTTTTTGTTACCTAGCTTATCTGGGGGTCAGTTATCCAATGTTATTTGTGGATTTTGTTTTTGGATAATTTTCCCATTCTGTAACTGAA
GTTCATCTATCTTATTGGGAGATTACTCATATGCCGCAGTTAAGGTTTTGTTTTTTAAATTCTTTAAAAAAAAACCTTTAATAATCGGCATTTTTTGCAC
AGGCCTCTAGGTATATTTGATTTTAAGAGACCTGAAAGGCAGTGTTTTATTGGATCAATTTAAAACAGAACCAGGGGTAGAACTCTACCCCAAACTGCAC
AGAATATGCTGTTGTACATCAGTTGCAACACCGAAGAAAATACACAAGCGTCATTAACTTATAAGTATAAAAATGGTTGATTTGCGTGAATTGTGATGCG
GCTGTGCTGTACTTGTACAGGGTGCTGCTAATAAATGCTGCAATAGGGGCTTTAAATCTGGTGGGAATGCAACCACTGGTTCCCAAACCACCCTTGGTGA
AAACCTGGCCGATAATGAATCACTACCATCCTCGCAATGCCTTATTAATACAGATCAATTATACAGAAACGTCCAACTATAGGGGAAATAGCACACCCTA
CTGCATTGCAGACTTTTATCCACTTATAGTTGGGCAGGCAGTGGGTTGTACCACTTTGATGCCTCCCTCCCCATTCATAGCTAATTTGCTCTGATATGGA
TAGAGGTTATAAACACGAATTGGACTGATATAGTTACAGACTTTGTTACAGTGGATACAGGTGTTGAACTGTGCTACAACAAGGGGCCTGCATGAAATCT
TTTTTTATTGATCTAGTAAAAACTTAATACCAAATTTTCAATTATTTTTTTTCAAGGACTTGAAATCAGTGAAAGGCAATACAGTAAAGAAGCTGTAGCA
CTTGTGCTTCTGCATAGTACTTGAAAACATTCTTTATGTTCAACTTCAGGGACTTTTCAATGTTGTTTGTAGCAGACAAATCACTAAATGTGTATTGTGT
GTGTGTAGTGAGCTTGTCCGTACAATGAGCAGTAAGTAGAAAGGCTGCTGGGATGCAGTTGTTAGGTAGGTAGGTAGGACTTTCCCTTTAATGGATGAAA
TCATATGGAAACATTCTTTGTGCAGCCCTGTGCTAATATTTCTATTAGACCTACAGATGTAGCCTCTTAAGTGCAGTAACATCTCTGGCTATACAAATCC
ACCATGAACAACTGGTCTGACTGCCTGCCTTTCAAAGAAAAAAAAAGGCAGTTTCTAGCAGTCCATAATTTCTGAGGTTGTTATACAAGTGTATGTATGT
AATAAAATGCCAGAGGGGAACATGCCACTCACTAAACCAGGGTTTCTGATGCCAGTGGTTGCCTGACGAGCTGGCCTCCAGCTATTGGAATGGTAACTGC
CTTCCATGTATAGTTGATAATCAAAATGCCTGGGTGCAGTATACACAAGTGCAAATGTAACCATTGAAACAGAATACCGCACTCACAGGACTTAGTGAAA
AAATACAATGAAGTTTATTGTGAAAAACGTCTGTCTAATGTTTCGGCCGTGTCCACAGCCTTTCTCAAAGTGAGACTTTCTCAAATATATATATATATAT
ATAATATATATATATATATATATATATATATAAAGGAAAGGAAATGTCACTGTTTTTATAAAGGGGGTAATATATATATATATACCCTCTTTATGTTGGG
CAACAAGCCTGACAGTCAGACAGAAGCTCTTTAGAATGGGACCCTGGACAGAAAATGGAATTTATGCTTCAAAAGATTTATTAGTTTGGTTCTGTATAAG
AGGAATGACCAGAGTGTAAATATATTTGACCAAACCGGAATTTGCAGGACTTATCAGATGAAAAGTGAAAAAGTCTAGCAACTAAAAGCTGCAGCATTTC
TTTAGCAGTCAAAGGAGATGGAACCTGCAATTTTGTTGACAGTGAATAGAACAAAGCAAATTTTCCTTTTATTTTCAACTTTTTTTTATTGTACAACATA
CAGAGAAACTGCAGGGATGACTGCAGCATTAGGCACAACTGTTGAGTGCTGCACCCTACATTACAGTGATTTTAGACAGTACGTTTTCAATAATTAATAC
ATGGAAAACATGAATTGCAGACAGAATTTTAATAGACTGTGGGTCACATGATGTGATTTTGCTGAACTGAGCCACAATCATGCCTATAATTCAAACCTTT
CTACCCCCTGCATACTGGGCAGATGGAAGCAGCTGCCACACACTCGCACTTCTGTCTCCCACTAGGTGCCAATATGGAACCCGCTGGCTCTCTTCAACTC
AATCTCATCACCACTGGCCAAAGCTGCTGGTCTGAAACAGGTTAACCTATCCATGTGTTTCCTTCATACCTATAGGTCTGCTAGAAATGTGGCATGAGTA
TTGTTTCCATTGGATTTTGCCTGTGATGAGAACAATGAGGATGGTAGTGGCACTGGCTGAGGGTTTATACTCGGAGGCATTATCTAAGAGCAATAAAGGC
ACTGTGTGTGTGTGTATCTGTGGGCTGTCCATCATTTGCTGTAGTTTGTTTGTTTCTGTTATTTGCAGAGTAGAAAATAATGGTACATAGATGTTACCAA
AAGCCTAGAGTAGAATATTTATTGTAGTGTAATGTTTGAGAACTTACACTTTTGTATTTCCTTACAGACAATAAAAGGAAAGATGTTTTAAAAAAAAAAA
AAAAA
5' EST: CX889093
[+]agcccgagtgccgtcagccggcggggagataacaaagggcgcagggggctcctcctatagcgggggctgtcactggctcacacgtaccggcacaacgagc
gcatccaccgagagcctgtgccagcccctgcaccatggccgagcagcacctccacacgcagggcaaagcagaaccgctggatccctcagaggatgcggaa
ctggcgctggtggggatcaatatgctcttgaataatggcttcaaagagtccgaccagctgttcaggaaatacaggaataacagtccactgatgagctttg
gtgccagttttgtcagctttttgaatgctatgatgactttcgaagaagaaaaaatgcagttggcatgcgatgatttaaaaatgactgaaaaactgtgtga
aagtgacgaaggcgtcatagaaaccataaagaataaaatcaagaaaaatgttgacattagaaagtcttctcagtccatggttgatcggctgcagagacag
ataattgtggcagactgccaggtttacattgcggtactgtcctttgttaagcaagaactgtcagcttatataaaaggtgggtggatcctgcgaaaagcct
ggaaaatatacaacaagtgctatgtggatataaatgcccttcaggaaatgtatcagaagaagacatctcaggagtctgatgctgcaaacgataatcacat
tgacgctgaaggtgtcacggaggattctcttaacaggctgaaaggtgctgtgagctttggctacggac
3' EST: CX889092
[+]ttttttttcttttttaaaacatctttccttttattgtctgtaaggaaatacaaaagtgtaagttctcaaacattacactacaataaatattctactctag
gcttttggtaacatctatgtaccattattttctactctgcaaataacagaaacaaacaaactacagcaaatgatggacagcccacagatacacacacaca
cagtgcctttattgctcttagataatgcctccgagtataaaccctcagccagtgccactaccatcctcattgttctcatcacaggcaaaatccaatggaa
acaatactcatgccacatttctagcagacctataggtatgaaggaaacacatggataggttaacctgtttcagaccagcagctttggccagtggtgatga
gattgagttgaagagagccagcgggttccatattggcacctagtgggagacagaagtgcgagtgtgtggcagctgcttccatctgcccagtatgcagggg
gtagaaaggtttgaattataggcatgattgtggctcagttcagcaaaatcacatcatgtgacccacagtctattaaaattctgtctgcaattcatgtttt
ccatgtattaattattgaaaacgtactgtctaaaatcactgtaatgtagggtgcagcactcaacagttgtgcctaatgctgcagtcatccctgcagtttc
tctgtatgttgtacaataaaaaaaagttgaaaataaaaggaaaatttgctttgttctattcactgtcaacaaaattgcaggttccatctcctttgactgc
taaagaaatgctgcagcttttagttgctagactt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe4 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: