XB-CLONE-3299716
Clone Name: IMAGE:7660838
|
Gene:
grin1
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC122961
[+]
AAGAGAAGAGGAGAGAGCTCACTGCTGCCTGGCACCTACCTGCCCATTGCACTTACCCCGGGCACTGGAGGGGGCACGTACCCAATCCTCCATTAGCCGG
CACTGCAATAAACCCAATCGGGGGGGACAGGAATTTAGGGAAGGAATCTGATTTTCCTGATATCAGCACCAAGGACATACGCTCCCTACTGGTAAAGGTG
CTCTCCCAGCCGCTTGCCCTTTCCTACTCTATTGCCACAGCCAATTAGGGGACAGAAGTGCCCACCCAGCCGTTGTTATATAAAGAAGGAGGGACTGTGC
CCGTCCCATGCCAATTATTGCCTATTCTGCCACAGCTAGGTATAGAGAGCCATTAGGGCAGTACTGCTGGCACGGCGCTTGGGCTCATTGCTAGTGTAGG
GACACCTTGCTTTCCCTCTCTGGCACGGCTAGGGGCTACGGGCACACTATACATACACTGTGCCAGCATCGAGCCATTTCTCTGTATGCTGGCACTGTAA
TGGGCAGAGATTAGAAGGCATTAGAGATTTCCTGCTCCACACTAGGTGGCTGGCACACTCCCTCGTGCCCTTCTTTATTGGTTTTGCCTCTCAGCTTCCT
CCTGTTTGGAGCTGAGAGCACCCACCAGGCAGGACATTGGCTCCGCTTGGCACCGCGCAATCCATGGCCACTATGCGCCTTTTCCTTTTGGCTGTACTCT
TTCTGTTCTCCTTCGCCCGGGCCGGATGTGACCCCAAAATCGTTAACATCGGGGCAGTGCTGAGCACCAAGAAGCACGAGCAGATCTTCCGGGAAGCTGT
AAACCAGGCAAATAAACGCCACGGCACCTGGAAGATCCAGCTCAATGCCACCTCTGTCACCCACCGACCCAATGCCATCCAGATGGCTCTCTCCGTGTGT
GAGGATCTCATCTCCAGCCAGGTCTACGCCATATTGGTTAGTCACCCTCCTGCACCCACGGATCACCTGACGCCAACGCCTATATCCTACACAGCAGGCT
TTTACCGGATCCCAGTCATCGGGCTGACCACTCGCATGTCTATATATTCCGATAAGAGCATCCACCTCTCGTTCCTACGCACGGTGCCCCCCTACTCCCA
CCAGGCCTTGGTTTGGTTCGAGATGATGCGCCTGTTCAACTGGAACCATGTCATTCTCATCGTTAGCGACGACCACGAGGGCCGGGCCGCTCAGAAAAAG
CTGGAGACCCTCTTAGAGGAGAAAGAGTCCAAGGCAGACAAAGTCCTGCAGTTTGAACCTGGAACCAAAAACCTGACGGCCCTCCTCCTTGAGGCCAAGG
AACTGGAAGCCAGAGTCATCATCCTCTCTGCCAGTGAGGACGATGCAACGGCGGTGTACAAATCGGCAGCAATGCTGGACATGACCGGCGCCGGCTACGT
CTGGTTGGTGGGAGAGAGGGAGATATCCGGAAGTGCATTGAGATATGCGCCCGATGGAATTATTGGGCTGCAGCTGATCAATGGGAAGAACGAGTCGGCG
CATATAAGCGACGCAGTGGCTGTAGCGGCCCAGGCAATACACGAGTTATTTGAAATGGAAAACATTACCGACCCCCCGAGGGGCTGCGTTGGAAACACCA
ATATATGGAAGACTGGACCTCTGTTCAAAAGGGTTCTCATGTCCTCCAAATACCCCGACGGGGTAACAGGAAGAATTGAGTTCAATGAGGACGGAGACAG
GAAATTTGCCAATTACAGCATAATGAACCTACAGAACCGCAAATTGGTTCAGGTCGGGATTTTCAATGGCAGCCATGTTATACAGAACGACAGAAAGATT
ATTTGGCCCGGCGGGGAAACAGAGAGACCACAGGGCTATCAAATGTCCACGAGGTTGAAGATAGTTACCATCCACCAAGAACCGTTTGTATATGTGAAGC
CAACAATGACTGATGGAACGTGCAGGGAAGAATACACCATCAATGGAGATCCCATCAAAAAAGTTATTTGTAACGGTCCCAATGAGACCATCCCAGGTCG
CCCGACTGTACCCCAGTGCTGCTACGGCTTTTGCATTGACCTGCTTATCAAACTTGCCAGAGAAATGAACTTCACCTACGAGGTTCACTTGGTAGCCGAC
GGTAAATTCGGCACTCAGGAGCGGGTCAATAACAGCAACAAAAAGGAGTGGAACGGCATGATGGGAGAGTTACTGAGCGGCCAAGCAGACATGATAGTCG
CCCCACTCACCATTAATAATGAGCGGGCTCAGTATATTGAGTTCTCCAAGCCATTCAAGTACCAAGGACTCACTATCCTCGTGAAAAAGGAAATCCCAAG
GAGCACTCCGGACTCATTCATGCAGCCGTTTCAGAGCACACTCTGGCTGTTGGTTGGACTCTCGGTGCATGTGGTGGCGGTGATGTTATACCTACTGGAT
CGATTCAGTCCGTTCGGGCGATTTAAAGTCAACAGCGAAGAGGAAGAGGAAGATGCTTTGACACTGTCTTCAGCCATGTGGTTTTCCTGGGGGGTCCTCT
TGAACTCTGGTATTGGAGAAGGGGCTCCCAGGAGTTTCTCTGCCCGAATCCTTGGCATGGTCTGGGCTGGATTCGCTATGATTATTGTAGCCTCCTACAC
TGCCAACCTGGCTGCCTTCCTGGTGTTGGACAGGCCAGAGGAGAGGATAACTGGCATTAATGATCCCCGGCTGCGCAACCCCAGTGACAAGTTTATCTAC
GCCACCGTCAAGCAAAGCTCTGTGGACATATATTTCCGGAGACAGGTAGAACTCAGCACCATGTACAGACACATGGAAAAGCACAACTACGAGAGCGCAG
CGGAAGCCATACAAGCTGTGCGGGACAACAAACTGCATGCGTTTATATGGGACTCGGCCGTGCTGGAGTTTGAGGCCTCTCAGAAGTGTGACCTTGTTAC
CACCGGTGAATTGTTCTTCCGCTCCGGCTTCGGCATTGGCATGAGAAAAGACAGCCCCTGGAAACAGAACGTCTCACTCAACATCCTAAAGTCCCACGAG
AACGGCTTTATGGAAGAGCTGGATAAGACCTGGGTCAGGTACCAGGAGTGCGATTCCCGCAGCAATGCCCCAGCCACACTGACCTTTGAGAACATGGCAG
GGGTCTTCATGCTGGTCGCTGGGGGCATTGTTGCCGGAATCTTTTTGATATTCATTGAGATTGCCTACAAGCGGCACAAGGATGCCCGCAGGAAGCAGAT
GCAGTTGGCCTTTGCTGCCGTTAACGTATGGAGAAAAAACCTGCAGGATAGAAAAAGTGGTAGAGCAGAACCTGACCCTAAAAAGAAAGCCTCTTTTAGG
TCCATCACCTCCACCCTGGCCTCCAGCTTCAAGAGACGTAGGTCCTCCAAAGACACGACATAAAAATCTGCAGAGCAGTACAGAACAGGAGCTGCCAGCC
CCCCCGCGCCTTGGCCCCAGTTGTGCCTCATGTTTGCTCTCTGTGTATTTGTATTTTACAGCAATACCACCCCACCGATATCACGGGGCAGCTAAATCTG
TCCGACCCTTCTGTTAGCACTGTGGTGTAACCCCCCCAACGGAGAGACAATGACTGTTCTGTGGGTACGGACGCGGGCAGGGCCGACGCCGGATACTGGG
ACTGGCACTGGATTTTATTGGGACATTGCAACAGTGACTGGAAAATGCCCCCCCCTCCCCACCGAGTAATCTGTAAATATATATATTTTTTTTTTCTCCC
CCGAGACCGGTTGGAATAAAAGAGACTTTTGTACGCCCCGATGGTTCTATTCGGATAATCCTTTGTGCGCAGGATGGGGGCCCGCGTCAGTGCTGCCCGC
TAAGGATTATGGCTCCGCCCTGCGTTTAGCTCATTGCATGGATAATCGCTGTATAATGCTGTATATACTGTCTTCTGCTATATATATATATATTATATAC
ACACCCCTGTCTGTACCATATGTTGTACATACTTGTATATATACATGGGCCGCGATCATGTAATGTTACTGGGGGGGGCAGGGCCCCCCAACTGATGGTT
TCCCCCATATCCCTGTTATTTGGGGGTGTACAACCCTGTGAGCAAGCAACAAATACTAAATAAATACCATATACACACAAAAAAAAAAAAAAA
5' EST: CX841878
[+]aagagaagaggagagagctcactgctgcctggcacctacctgcccattgcacttaccccgggcactggagggggcacgtacccaatcctccattagccgg
cactgcaataaacccaatcgggggggacaggaatttagggaaggaatctgattttcctgatatcagcaccaaggacatacgctccctactggtaaaggtg
ctctcccagccgcttgccctttcctactctattgccacagccaattaggggacagaagtgcccacccagccgttgttatataaagaaggagggactgtgc
ccgtcccatgccaattattgcctattctgccacagctaggtatagagagccattagggcagtactgctggcacggcgcttgggctcattgctagtgtagg
gacaccttgctttccctctctggcacggctaggggctacgggcacactatacatacactgtgccagcatcgagccatttctctgtatgctggcactgtaa
tgggcagagattagaaggcattagagatttcctgctccacactaggtggctggcacactccctcgtgcccttctttattggttttgcctctcagcttcct
cctgtttggagctgagagcacccaccaggcaggacattggctccgcttggcaccgcgcaatccatggccactatgcgccttttccttttggctgtactct
ttctgttctccttcgcccgggccggatgtgaccccaaaatcgttaacatcggggcagtgctgagcaccaagaagcacgagcagatcttccgggagctgta
aaccaggcaaataaacgccacggcacctggaagatccag
3' EST: CX841877
[+]gtatatggtatttatttagtatttgttgcttgctcacagggttgtacacccccaaataacagggatatgggggaaaccatcagttggggggccctgcccc
ccccagtaacattacatgatcgcggcccatgtatatatacaagtatgtacaacatatggtacagacaggggtgtgtatataatatatatatatatagcag
aagacagtatatacagcattatacagcgattatccatgcaatgagctaaacgcagggcggagccataatccttagcgggcagcactgacgcgggccccca
tcctgcgcacaaaggattatccgaatagaaccatcggggcgtacaaaagtctcttttattccaaccggtctcgggggagaaaaaaaaaatatatatattt
acagattactcggtggggaggggggggcattttccagtcactgttgcaatgtcccaataaaatccagtgccagtcccagtatccggcgtcggccctgccc
gcgtccgtacccacagaacagtcattgtctctccgttgggggggttacaccacagtgctaacagaagggtcggacagatttagctgccccgtgatatcgg
tggggtggtattgctgtaaaatacaaatacacagagagcaaacatgaggcacaactggggccaaggcgcgggggggctggcagctcctgttctgtactgc
tctgcagatttttatgtcgtgtctttggaggacctacgtctcttgaagctggaggccagggtggaggtgat
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: