XB-CLONE-3640605
Clone Name: IMAGE:7660076
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Gene:
ywhag
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121366
[+]
GACGCATTTGACATTTAAGGAGGCTTTGCCTTGGTCCAGCCTCTGCATCTGTTCTGCGCTGTCTCCGCTGCAGTCGAGTGCGAGTCGCAAGCCCCGAACC
CATCCGCACGTTCTCTTCGCACGGTCTCGCACTCAGCAACATGGTGGACCGCGAGCAGCTGGTGCAGAAAGCCCGACTGGCGGAGCAAGCTGAGCGCTAT
GATGATATGGCGGCTGCTATGAAAGCCGTTACAGAATTGAATGAACCACTTTCCAATGAAGAAAGAAATTTATTGTCTGTTGCTTACAAGAATGTAGTTG
GAGCTCGGCGCTCATCCTGGAGGGTTATTAGTAGCATTGAGCAGAAGACTTCTGCAGATGGCAATGAAAAAAAGATAGAAATGGTACGAGCTTATCGTGA
AAAAATTGAGAAGGAATTGGAAGCAGTTTGTCAGGATGTGCTAAGCCTTTTGGATAATTTCCTCATCAAGAATTGCAGTGAAACCCAATACGAAAGTAAA
GTGTTCTACTTGAAGATGAAAGGAGATTATTATCGATATCTAGCTGAAGTGGCCACTGGTGAGAAGAGGGCGACAGTTGTTGAATCCTCCGAGAAAGCAT
ATAGTGAGGCTCATGAGATAAGTAAAGAGCATATGCAGCCAACCCATCCTATCAGGCTTGGCCTGGCCCTGAACTATTCTGTGTTCTATTATGAGATCCA
AAATGCTCCTGAACAGGCTTGCCATCTGGCCAAAACCGCCTTTGACGATGCCATTGCCGAGTTGGATACCTTGAACGAGGACTCCTACAAGGACTCAACA
CTCATCATGCAGCTTCTACGTGACAACCTAACGCTCTGGACGAGCGACCAGCAAGACGACGACGGTGGGGAAGGCAACAATTAAAATGTAATGAGGGACT
GGCAGCCGCACGCTGATGCTACTACCGCAGTCTTTATTTTTTTTCCCACAAGTGGGGGGTTAAGGGTTGGGGGATGGTATGGAAGGGACATCCTCCCCAG
GGAAGACCCTACCACCTGTCTTTGATTGCCTCTTCGACATTTTGCCAAAACACCACGAATGGAAAGTTAGACTGGCTGTGCTGGTATGGAACGGCAGCCT
CACACTGGCACATGGACTGTTCTGTAGTTAATACAAGTGGAGCTGTTTTTATTTTTAAGTTATCGCTAGACATATTTAGGAAGAGTTTTAACAGTAGGAA
TAACATGAATGGAATGGCTTTTTTTAAAATAGTTTTGTGGTTCCAGTAAGTTATTTTATATTTATTTTTTTTCTAGCTAAATGCACGTCTTGCCCTTCAT
GCTATATACTATTTATCTATTTAATATGTTGCTCTTGTGTACTTTGTGCACTCCACATTACTCCAGTTGATACAGTGTTCACTCCAAAGTATTTTTAGGT
AGAATTCTTTTTTTATTTTAAAGAAAGATTGGTTATCATAGTATTGCTTTTGCTTTAAGTCCATGGTTGCATTTTTGATGGCTCATCAGTGACAGTTTTA
AAAAAAGGGCAGTGTAGGTTGGTAAGAGCAGTTATGGGGCTGAAGAAAGGAAATAAAATAACTTTTGTAACCATTTTAAAATGAATTAAGATTTCAGGTC
TGTAAAGTACACTGCTGTTTCACTGCCACATCTTAGAAATTGATATAGATATTCCCCACACTTCAGTCTCTCACTGCATGGTTTTCCTTGAAAAATATTA
TGTTGTCTTTATTATCCATTGTGGATTTAATTGGTTTTATTTAAAAATTCAGTGACATAATACACTTTAATAATTGGGCTTTTAATTCATCTTCATAAAC
AAACGCTTCTCCGTGTTTCCACGGCATCTACAGCAATGCCACATGTTCTGCAGCTGTACTAGTTCTCCCTAAAATGATATGTTGTATGATTTGTTTCCTT
TGCATTCTAGCATCTGAAAGTGAGTAATCCCATAGAGGAGTACACTAAAGTATAAAGCGTTGTCACTAGCTCATAGCATATTAAGGCAAAGACATTTTCC
CTTTCTAGGCAGGTAAAGGAACACGTACCTATAAAATCTGTTTACTGTAGGCCAACTGTAAAATTGCAAGGCATGAATATGCAAGAAAGCTTAAGTGTCT
TACTTTGTTAAACTATTACTGTGTCCAACAGTAAGGGTTATAATCCAAATGGTTTGAAGTTTATGTATTCTCTGTGTTTGCATGAATACGAATGAGTTTG
CCCAATAAGAAAAACCCTGCTTTATGTAATTTCCTGAATGGCTTGTTGACTCATAACCAAAGTTCTAAACGTTTTAGTTTAGAAGTTTTTAAGCAAATCT
GTATAGATTTTTGTTGTTGTTGTTGCTGTTGTTTTAACATTGGAAGGACTGATGCCTTTCAAATTAGCAGATTATATATATTTTTTTTTATGAGCCATAG
GTAATTACAGGATATTATCAATTTTCCAGTAAAATCACGTTCATCTTTGCCACTATATGATAAAATCCAGGAGATATATAACAATGGTACAGTTAACATG
TCTGTTATTTTTTGTAATAACAAACTACAGCATCGTTTGCAGATCAGAACACCGCCTTTAGGAAAACACATATAAATAAAAAGAAAGACTTGATTAATTT
TAACATTGTCCAGTCTGAAAGTAATTTACTGGAATTACATTACTATTTTTTTCTGGCTGCTATAAAACCTTAAATATTTTGAGAGGTCTCCAAGTGCTTG
GAATAAAGAAATGGGTTAAAGCAGCATTTTTTTTTGTATCTGCACTTGCCTATATAACAGTTTCTCCAATGAAATGATTACCGCTGCATTAATCTCAATA
CAATATTGTGCATGCTAGTGTTGTATTTCTATAACGTAGCTTGGAATTAAATTATACAGTAGATGTTATGTATTCCTATGGCAAAACAAACTAGTCTTCA
ATTTTATTGCCTTTTTTTTATGTTTTTTTTCTTTTTATGTGAAAATCATGTCTCTCAATTGGAAAGGAAGGAGGAAAAGGTAGATTGTATCTACCACAGT
GCAATAGGCACATATTTGGTCTAATATTGATGTTGCTATTGTGACATGCAAATATAATTTTGCTTAAAAAAAAAAAAAAAAAAAAAAAA
5' EST: CX840494
[+]cgcatttgacatttaaggaggctttgccttggtccagcctctgcatctgttctgcgctgtctccgctgcagtcgagtgcgagtcgcaagccccgaaccca
tccgcacgttctcttcgcacggtctcgcactcagcaacatggtggaccgcgagcagctggtgcagaaagcccgactggcggagcaagctgagcgctatga
tgatatggcggctgctatgaaagccgttacagaattgaatgaaccactttccaatgaagaaagaaatttattgtctgttgcttacaagaatgtagttgga
gctcggcgctcatcctggagggttattagtagcattgagcagaagacttctgcagatggcaatgaaaaaaagatagaaatggtacgagcttatcgtgaaa
aaattgagaaggaattggaagcagtttgtcaggatgtgctaagccttttggataatttcctcatcaagaattgcagtgaaacccaatacgaaagtaaagt
gttctacttgaagatgaaaggagattattatcgatatctagctgaagtggccactggtgagaagagggcgacagttgttgaatcctccgagaaagcatat
agtgaggctcatgagataagtaaagagcatatgcagccaacccatcctatcaggcttggcctggccctgaactattctgtgttctattatgagatccaaa
atgctcctgaacaggcttgccatctggccaaaaccgcctttgacgatgccattgccgagttggataccttgaacgaggactcctacaaggactcaacact
catcatgcagcttctacgtgacaacctaacgctctggacgagcgaccagcaggacgacgaacgt
3' EST: CX840493
[+]aagcaaaattatatttgcatgtcacaatagcaacatcaatattagaccaaatatgtgcctattgcactgtggtagatacaatctaccttttcctccttcc
tttccaattgagagacatgattttcacataaaaagaaaaaaaacataaaaaaaaggcaataaaattgaagactagtttgttttgccataggaatacataa
catctactgtataatttaattccaagctacgttatagaaatacaacactagcatgcacaatattgtattgagattaatgcagcggtaatcatttcattgg
agaaactgttatataggcaagtgcagatacaaaaaaaaatgctgctttaacccatttctttattccaagcacttggagacctctcaaaatatttaaggtt
ttatagcagccagaaaaaaatagtaatgtaattccagtaaattactttcagactggacaatgttaaaattaatcaagtctttctttttatttatatgtgt
tttcctaaaggcggtgttctgatctgcaaacgatgctgtagtttgttattacaaaaaataacagacatgttaactgtaccattgttatatatctcctgga
ttttatcatatagtggcaaagatgaacgtgattttactggaaaattgataatatcctgtaattacctatggctcataaaaaaaaatatatataatctgct
aatttgaaaggcatcagtccttccaatgttaaaacaacagcaacaacaacaacaaaaatctatacagatttgcttaaaaacttctaaactaaaacgttt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: