XB-CLONE-3915621
Clone Name: IMAGE:7091391
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Gene:
rps5
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Species: Xenopus tropicalis
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Sequence:
5' EST: CK653624
[+]
taattaatcccccccccccccgctctttccgctccgagctccgaccggttaagacacagccgaggagacacgatgtcagattgggagaccgttccagttg
gggctgagacccctgaaattaaactgtttggaaaatggagcacagatgatgtacaaataaatgatatttctctacaggattacattgcagtgaaggaaaa
atatgccaagttcctgccacacagcggaggacgttatgctgcaaaacgcttccgtaaggctcagtgccccattgtggaacgtttcaccaactcccttatg
atgcatgggaggaacaatggcaaaaaaactcatgacagtcagaattgtaaagcatgcctttgaaatcatccacctgctaaccggggagaatcccctgcaa
gttttggtaaatgccatcatcaacagtggtcctagggaagattctacacgtattggtagagctggaactgtgaggagacaagctgttgacgtttcacctc
ttaggagagtaaaccaggctatatggctgctttgcactggggcccgtgaagctgcttttaggaacattaagacaattgcagagtgcgttgctgatgaact
tattaatgcagccaagggttcctcntactcatatgccatcaagaaaaagatgaactggagagagtagccaatccacccgttaagctcagcagttaatgag
agtatacgtctcatt
3' EST: CN326455
[+]ttttttttttttttttttttgttacagaacaaatttctttattatgagaacgtatactctcattaaactgctgatgctttaacggttggatttggctact
ctctccagttcatcctttttcttgatggcatatgaattaaaggaacccttggctgcattaataagttcatcagcaacgcactctgcaattgtcttaatgt
tcctaaaaacagcttcacgggccccagtgcaaaacaaccatatagcctggtttactctcctaaaaagggaaacgtcaacagcttgtctcctcacagttcc
agctctaccaatacctgtaaaatcttccccaagaacactgttgatgaagggatttaccaaaacttgcaggggaatctccccgggtaacaaggggatgaat
tcaaaaggatgctttacaattctgaatgtcatgaatttttttgccattgttcctcccctgcctcataaaggaattggggaaacgttccacaatggggcac
tgaaccctaccgaaaccttttgcaacataacctcctccgctgtgtggcaagaactttgcatatttttccctctctgcaatggaatcctggagagaaaatc
atttatttgtacatcactctgtgctccattttctcaacagtttaatttctcgggtctcaacccccacagggaacgtctcccatctgacatcctggctccc
ccgctgtgtttaacccggccgagccgaagggaaaagaggggggggggggggggggattttttttcccggagtgaaaaaaaacaattaccctggatttcgg
ggcccgaaaaaaaccaagggggcagttgggaaccggggaggg
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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