XB-CLONE-4351865
Clone Name: IMAGE:7027179
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Gene:
sfxn3
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Species: Xenopus tropicalis
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Sequence:
5' EST: CF784620
[+]
taattaatcccccccccccccggagcaaggacgcagcgcagtattatgtctcaggaactgccctttaacattaatatcaaagaaccacgatgggaccaga
gcacctttgaaggaagagccaagcacttcttcacagtgactgatccacgaaatgtcctacttgggcctaaagtcctagaggaagcaaagaacattataca
gaattacagaaaggggatccccacaccaggtttaactgaagaccagctatggcgagcaaaatacatctacgattctgctttccatccggatacaggagag
aagatgatcttgataggaaggatgtctgcacaggtgcccatgaacatgaccatcactggctgcatgctgacattttacagaacaactccagctgtcatat
tttggcagtgggtaaatcagtccttcaatgctattgtgaattatacaaacaggagcggtgatgcacccataacaacaagccagctgggggcagcctacgt
cagtgcaactacaggagctgttgttactgctctgggactcanaactctgactaagcatctaccatctctgattgggagatttgtttcatttgctgcagta
gcagctgccaattgcatcaacatccctttcatgangcagagaggattaaaatatggcatccccatcacagatggaaaatggcaacagactcggagagtct
actaaagctggctaagcaggccatagcacaagtggggggggtctcggaattggaaatggctgcccctgcaaatggcaattccc
3' EST: CF784619
[+]tttttttttttttttctttttttttttttttttttttttttttaaaagatatgcatcttattagtgtctttacatatacaaatcagcagactttagctaa
gatacatataaataatagtgacaaatattgatcttttttggtaatactttcacttcatctgaactgtaggaaatacattgatcttgcgagattcctgcac
aacatgagtttatttgggttgcagtgtttaaagtcctttgttaaaatacacaatcttggtgcctgggctcttctccagaacctgagcttgaacttccggc
tccaggctggaaacactcattgagcttttctgagggaaaagtgcacagcacagaggtgttgcgaaaaccaagcaaaagccaaccagccccacttgtagag
gtgcattcatccatgggtaccgctttaggaacgctctcttctccaaagcattcattatcaccgggggaattgccattgcaggtgcagccattccaatccg
agacaccaccacttgtgctatggcctgcttagcagctttagtagactctccgagtctgttgccattttcatctgtgatggggatgccatattttaattct
ctctgcctcatgaaagggatgttgatgcaattggcagctgctactgcagcaaatggaacaaatctcccaatcagagatggtagatgctttagtcagaagt
tttgagtcccagagcagtaacaacaggctcctgtagttgcacttgacgtaaggctgcccccaactgggcttggttgttaatgggtgcatcaccgcctccc
ggttggtataatttcacaataggcatttgaa
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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