XB-CLONE-4352415
Clone Name: IMAGE:7027389
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Gene:
gpr143
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC082732
[+]
CGGATCTGCCTGACACTTTCTCTTCTGCTCCTTCCCTTGGGAGACTGCGGGGCTTCCGAGCGTAAGGATGGCTTCCCCCAGGCTGGAGACTTTCTGCTGC
CCCAACAGGGATCCAGCTACTCAGTTAGTGCTTGATTTCCAGCCTCAGATCTATGGCTCGCTGTGTATCGGCAGTGGCTTGGTGAGTCTCCTGCTGACCA
TTGTCCAGCTGCTGCCCAAGACAAAGCAGGGTTACAGGAGGCTAGGGAGAGCCATGCTGCCAAAACCTTCCTCGTCCAGAATCTTGTTTCTAGTTATTAT
CTGTGACCTGCTGGGCTGCCTAGGCATTTTAATTCGATCATCAGTTTGGATTTCATCCCCAGGTTTCATTAGTAATATGTCACTAATGAACACGTCAGAC
ATCTGGCCTTCAACTTTTTGTGTTGGAAGTGCGATGTGGATACAGCTGTTTTACAGTGCAAGTTTCTGGTGGTTATTTTGCTATGCAATTGATGCTTACC
TGGTGGTTCGCAGATCAGCAGGAATAAGCACAATTGTTTTGTATCACATGATGACATGGGGCCTGGCACTGATGCTCTGCATCGAAGGTGTGGCTATGCT
TTATTATCCTTCCGTTTCCAATTGTGAAAACGGACTAGAACATGCAATCCCTCATTATGTCACAACCTATGCGCCACTTCTTATTGTAATGTTCGCTAAT
CCAATCCTCTTTAGGAGAACAGTCGCTGCAGTTGCTTCTTTACTGAAAGGAAGACAAGGGATTTATACAGAAAATGAAAGACGGCTGGGGACAGAAATTC
AGCTCCGTTTTTTCAAGATTATGTTGGTGTTTATGATCTGTTGGACAGCCAATATTATCAATGAGACCCTTTTGTTCTACCTGGAAATGCAGCCAGACAT
CAACACAGATCAGCTGAAAAATGTCAGGAATGCTGCTCTCATCACATGGTTTATAATGGGTATACTGAATCCAATGCAAGGCTTTCTCTTCACTCTGGCT
TTCTATGGGTGGACAGGATGGAATGTTGATTTTAATTTCAGACAGAAGGAAACAGCTTGGGAACGAGTGTCCACATCTACAATAACTGAAACTGCACACA
ATGGCACCAATGGATCTTTCCTGGATTACCCTGGCTATATACAGAACCAAAACAAGACTGAAATTGGAAACAGCCAACAAACAGATGAAGCTCTGAGCAT
ACTGTCTGAAGGTAATGGGAGTATAGTGGAACGACTGAACAGGAACTCCCCCATTTATCAAGGATGGTAGTTTGTTGATGTCATTTCACATCTAGGCAAT
TATTCCAGCCTTGAATACTTTGGTATAGTATTTGTGCTTCCTTTGGCAGACAAGCAGTCATAAAACCTTCACAATAAAACAAATAATGTGCTATGGAGAA
GCAATTGCAATGGCTGAACTTAAAACACAATCTCATACTCCATTATACAGTTGCCTATTGGAAAAATAATAAACCTGTGTCTCAATTTAACATTTTGTAA
CAGATAATTTGAGTGCATGTTGCCTGCCACTGATGTTGTGTAATCAAGATGGGATATAAAGCCCTTTTTAAGTCTCTGCATCTTTTGCTGTACTCAGGGA
AATAATATGGCTGAATAGGACTAGTCCATAAACAGAAATAACTTTGGATGTTAATGGGATAGAGGAAGATATGGTAATTTGCTATTTCAATAAAATATTT
TTTGTACAAAAAAAAAAAAAAAA
5' EST: CF784264
[+]taattaatccccccccccccccggatctgcctgacactttctcttctgctccttcccttgggagactgcggggcttccgagcgtaaggatggcttccccc
aggctggagactttctgctgccccaacagggatccagctactcagttagtgcttgatttccagcctcagatctatggctcgctgtgtatcggcagtggct
tggtgagtctcctgctgaccattgtccagctgctgcccaagacaaagcagggttacaggaggctagggagagccatgctgccaaaaccttcctcgtccag
aatcttgtttctagttattatctgtgacctgctgggctgcctaggcattttaattcgatcatcagtttggatttcatccccaggtttcattagtaatatg
tcactaatgaacacgtcagacatctggccttcaactttttgtgttggaagtgcgatgtggatacagctgttttacagtgcaagtttctggtggttatttt
gctatgcaattgatgcttacctggtggttcgcagatcagcaggaataagcacaattgttttgtatcacatgatgacatggggcctggcactgatgctctg
catcgaaggtgtggctatgctttattatccttccgtttccaattgtgaaaacggactagaacatgcaatccctcattatgtcacaacctatgcgccactt
cttattgtaatggtcgctaaatccatcctctttaagagaacagtcgctgccgttgcttctttactgaaaggaaaaacaagg
3' EST: CF784263
[+]tttttttttttttttgtacaaaaaatattttattgaaatagcaaattaccatatcttcctctatcccattaacatccaaagttatttctgtttatggact
agtcctattcagccatattatttccctgagtacagcaaaagatgcagagacttaaaaagggctttatatcccatcttgattacacaacatcagtggcagg
caacatgcactcaaattatctgttacaaaatgttaaattgagacacaggtttattatttttccaataggcaactgtataatggagtatgagattgtgttt
taagttcagccattgcaattgcttctccatagcacattatttgttttattgtgaaggttttatgactgcttgtctgccaaaggaagcacaaatactatac
caaagtattcaaggctggaataattgcctagatgtgaaatgacatcaacaaactaccatccttgataaatgggggagttcctgttcagtcgttccactat
actcccattaccttcagacagtatgctcagagcttcatctgtttgttggctgtttccaatttcagtcttgttttggttctgtatatagccagggtaatcc
aggaaagatccattggtgccattgtgtgcagtttcagttattgtagatgtggacactcgttcccaagctgtttccttctgtctgaaattaaaatcaacat
tccatccctgtcccacccattgaaaagccagaagtgaaaaagaaaagcccttggctttgggatttcagttatacacccattataaaacccatggtggatt
gaaaaagccggccatttccctgaaaaaatttttttcacccctgggt
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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