XB-CLONE-4353705
Clone Name: IMAGE:7026273
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Gene:
acp5
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC081357
[+]
GAGTCTGAAAACAATCGCACTGAAAGGAACTTCTCTGCTGGGAGGGAGGTTCCCTCAACAGAATGGATATTTTCCTGCTCTTCTTCATCTCATCCCTCCT
GCCTGGGATCTGCACTTACGCGGTCCCTGGTCAGAAGCCCTCCCTTCGCTTTGTGGCTCTCGGAGATTGGGGGGGACTGCCCCTTCCCCCCTATACTACA
AGACAGCAGGAACTGGTGGCTGAAGAAATGGGCAAAACCGTGGCCAAACTGGGTGCAGACTTTATTCTGTCTTTGGGTGACAATTTCTACTATGACGGTG
TCACTGATGTGTCTGACCCTAGATTCAAGATCACTTTCGAGTCGGTGTACAATGCCGAGTCCCTCATCAACCTACCTTGGTTCATACTGGCGGGAAATCA
CGACCACAAAGGGAACGTTTCTGCGCAGATCGCTTACACCAATGTCTCCAAGCGATGGAACTACCCTGATTACTACTACGATCTTTCCTTCACCGTCCCT
GGCAGCAACGTTACAGTGAGACTTCTGATGCTGGATACAGTCGAGTTGTGCGGAAATTCAGATGACTTCCGTGACGGGCAACCCCGCGGTCCAACCAATC
TCAAAACGGCAGGGTCGCAGCTGGAGTGGCTGGTAGAGAAGCTGCAGAGCGCCAAGGAGGATTACTTGCTGGTGGCTGGTCATTACCCGGTGTGGTCAGT
GGCGGAACATGGGCCGACTAACTGCCTGCTCCATAGCGTAGAACCATTGCTTAAGAAGTACAAGGTCACAGCCTACCTGTGTGGACATGAACACAACATG
CAGTACCTTCAGGATGACCAGGGCATTGGCTATATGCTGAGTGGAGCTGGAAACTTTATGGAGAATTCCCAAGTTCACGAGGACGATGTCCCCAAAGGTT
ATTTGAAGTTTTTTCAAGGTGATCCTGACACGATGGGAGCCTTTGCCTTCATAGAGATCACCCCTAAAGAAATGACCATAACCTACGTACAATCCGACGG
CAAATGCCTCTATCAGACCACGTTGTACCCTCGCACCTTTTAACTGGAGCCTGAGACGGTCGTGCACTGACTGTGACTGTATTACGGGAAGGGGGTTAAT
TTTATTTTACATGACAATCAGTCATGGCCGTGATTGCCTTTACAAGTATTTTAACATGCTGGGCAGGTCCTCTGCAACCTTACACTGTTTAATGGGATCA
ATACTGTTCTATAAAGTCAGGGACTAAGCGTAAATGCCAAAACATGATGCTTTTAACCTTCATTTTGCACTTGTGAGTATTCATAGGCATATACTAGTAA
GGCATGGATAAAGACTATTACATTAAGGTGAAACTTCCCCAGAAGTGGGGCAGGACAGCAGGCACCAATAACATGCCCAGTTTAGTACTGGGGTGTACTT
TAGCCCCAAGGGGGCACTGGGAAAATGTGCGTGCATAAATTTACCCCACGGCATGTTGTCTGACCCCAACTAACAGCACAAGTCATTGGAATGATAACTC
TGGATGCTGCAGGGGAAGTATATTGTTTAAAAAAGTACCATTTGTGAAACAGATCTATAAAGCATCTTGGTTTAAAGGAAAATAAATATAAAACAGAAAA
GTTCCCCTTAAGGTCCCCATACACGGGCCGATAGTAGCTGCCAATATTGGTCCCTTGGACAGATTCAGCAGCTTATTGGCCCGTGTAGGGGGAACGACGA
CTGGCCTGTCCGACTGGTATTTGGCCTGAAATTGGGCAGATATCGATCGGGCAGGTTAAAAAATTCAGTCGGATCGGGGACCACATCGGCTCGTTGATGC
GGCCCCCAAACTGACTGCGCCCATTACAGTCGTTATAATTAGCCTAAATTCCCCCCGATATCACCCACCCGTAGGTAGGGATATCAGGAGAAGATCCGCT
CGCTTGGCAACATCGCCAAGCGAGCGGATCTTAACGTGTATGGCCACCTTTAGGCATCATATGAATTGTAAAACCTATCCTTGTTGTAAGTCTTTATGCC
TAGAGGAACAATCTCATTAGCTGTGGCCCTATAAGCCAACCTTTAATATAATCAGTATTATCCTCAGCCTTTTAATCAATTTAACACCAGCTTAATTTTC
AGATTTTATGTGCTGCTATCTTCTCCAATTTGGCAATCTTTACGGGTAAAAAAACTAAATCCGCTGAGTGATTGTGTCATTAGAGGTTTTTCCCAAAGTG
TTTTTATGCACGTTTTTAAGTAGATACAGGAACTTCCAATTAATGTTGTATTTTTGTAATGAACATTTTTGCTTTTTCAAAATGATGTTGATATTTTGAT
AATACTGTTGGTATTTTGATAAGTTAAAAGAAAATTACATTAAAATAAGAAATACAGAAATAAGTCTGTGTAATTTACTCAGGTTTAGATTGTTAGTCAC
CCTGGCCTCTTAAACTGCTTTCTTTTTAATAAGTGCTCTTTTATGTGTTTGTCTGTTACCAGAAAATAATACAGAAATAAATTTATCAAATGAAAAAAAA
AAAAAAAA
5' EST: CF783444
[+]taattaatcccccccccccccgagtctgaaaacaatcgcactgaaaggaacttctctgctgggagggaggttccctcaacagaatggatattttcctgct
cttcttcatctcatccctcctgcctgggatctgcacttacgcggtccctggtcagaagccctcccttcgctttgtggctctcggagattgggggggactg
ccccttcccccctatactacaagacagcaggaactggtggctgaagaaatgggcaaaaccgtggccaaactgggtgcagactttattctgtctttgggtg
acaatttctactatgacggtgtcactgatgtgtctgaccctagattcaagatcactttcgagtcggtgtacaatgccgagtccctcatcaacctaccttg
gttcatactggcgggaaatcacgaccacaaagggaacgtttctgcgcagatcgcttacaccaatgtctccaagcgatggaactaccctgattactactac
gatctttccttcaccgtccctggcagcaacgttacagtgagacttctgatgctggatacagtcgagttgtgcggaaattcagatgacttccgtgacgggc
aaccccgcggtccaaccaatctcaaaacggcagggtcgcagctggagtggctggtaaaaaaactgcaaagcgccaaggaggattacttgctggtggctgg
gtcattacccgggggttggtcagtgggcggaaacatggggccgaactaaattgcctggcttccaataacgttagaaccatttgccttaagaaagtaacaa
agggtcacaagcccctaacctgtggggga
3' EST: CF783445
[+]tttttttttttttttcatttgataaatttatttctgtattattttctggtaacagacaaacacataaaagagcacttattaaaaagaaagcagtttaaga
ggccagggtgactaacaatctaaacctgagtaaattacacagacttatttctgtatttcttattttaatgtaattttcttttaacttatcaaaataccaa
cagtattatcaaaatatcaacatcattttgaaaaagcaaaaatgttcattacaaaaatacaacattaattggaagttcctgtatctacttaaaaacgtgc
ataaaaacactttgggaaaaacctctaatgacacaatcactcagcggatttagtttttttacccgtaaagattgccaaattggagaagatagcagcacat
aaaatctgaaaattaagctggtgttaaattgattaaaaggctgaggataatactgattatattaaaggttggcttatagggccacagctaatgagattgt
tcctctaggcataaagacttacaacaaggataggttttacaattcatatgatgcctaaaggtggccatacacgttaagatcccgctcngcttggcgatgt
tgccaagcgagcggatcttctcctgatatccctacctacgggtgggtgatatcgggggggattttaggcttattaataccgactggaatggggcgcagtc
agttttgggggcccgcatcaacggagcccgaaggtggtcccccgattccgacgggaatttttttaaacctgccccggattggaaattctggccccatatt
tccggggccaaaataccaatttcgggagaaggggccagttccttacgtttcccccccctacacggggggc
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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