XB-CLONE-4355599
Clone Name: IMAGE:7030140
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Gene:
rrm2.2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC080161
[+]
TCTCATCTTTCCCTCAGAGTATCGGCTGTTCTATTCCTTTCCCAGGGGACGTCGGGCAGGTCGTTTTAATCTATTTTACTTTACCCTTTCTTTCCTACGA
AACTTTTACTTGAACAAAATGCTGTCTGCCCGCAAACCGTTCGCTCAGCTTAACGAGAACGTTTCTCCCATGAAGAACCTGACCCTGGCAGAGAAAGAGA
ATACGCCGCCTTCCCTTAACAGCACCCGAGTCCTGGCCAGCAAGACCGCCCGTAACATCTTCCAGGAGGCAGAAACGACTAAGTCAAAAGCGCCAAAGGA
TCCTAGAATTCAGGATGAGCCCCTTCTGAAGGATAATCCACATAGATTTGTGATCTTCCCCATTCAGTATCATGATATCTGGCAAATGTACAAGAAAGCA
GAAGCTTCATTCTGGACTGCTGAGGAGGTCGATTTGTCTAAGGACCTTCGGCACTGGGAATCCCTGAAGGCAGAAGAAAAATACTTCATCTCTCATGTGT
TGGCCTTTTTTGCAGCCAGTGATGGAATAGTAAATGAGAACCTGGTGGAGCGGTTTAGCAAAGAAGTGCAAGTTACAGAGGCTCGCTGCTTTTATGGCTT
CCAAATTGCAATGGAGAATATTCATTCTGAGATGTACAGCCTTCTTATTGACACCTACATCAAAGATCCCAAAGAAAGGGAATACCTCTTTAATGCTATT
GAAACTCTGCCTTGTGTGAAAAAGAAGGCTGACTGGGCTCTGCGCTGGATTGGTGACAAACAAGCAACTTATGGTGAACGAGTGGTGGCATTTGCTGCTG
TTGAAGGGATTTTCTTCTCTGGTTCATTTGCATCAATTTTCTGGCTAAAGAAACGGGGGCTGATGCCTGGACTCACTTTCTCTAATGAACTTATTAGCAG
AGATGAAGGTTTACATTGTGACTTTGCTTGTCTTATGTTCAAACATCTCGTAAACAAACCATCAGAAGAGCGTGTTGTTCAACTTATTACTGATGCTGTT
CAAATTGAACAGGAATTTTTAACTGAAGCTTTGCCTGTAAATCTCATCGGAATGAATTGTACATTAATGAAGCAGTATATCGAATTTGTTGCAGATCGTC
TTCTTCTAGAGCTTGGCTTTAATAAGGTTTTCAAAGCCACTAATCCATTTGACTTCATGGAGAACATTTCTTTGGAAGGAAAGACTAACTTCTTCGAGAA
GAAAGTTGGCGAATACCAGAAGATGGGTGTCATGTCAAAGCCAAAAGACAACACTTTCACACTAGATGCTGACTTTTAAGCACTGACTTGTGCCATAACA
TCTGTTACTTGAAAAGTGCTTCCATGGCCTGTTGCAACCAGCAGTATGGGGACAGTAATAAGCTGCAGTACATGAAGAAGCAATGACTGAACTGGTGGAT
TCTGCTGATGCTAGCATAGCCACTTTAGCCTGTACTTTTGGAAGCAGGGGCAGTGGATTTACATTGATAACACTCATGGGTACAGAAATTTTGTACAGCT
TGTTGTGTATTTTACTGGGTGCTGTGTACTCTGTAGGGGGGGAAAGAAACTGCTGCTTGGCAGCATTTCCTTAATTTTTTATACTTTATTTTATAAAAGC
TGCACTTTACATAATAAACAAATAAGAAACTAAAAAAAAAAAAAAAA
5' EST: CF782385
[+]taattaatccccccccccccctctcatctttccctcagagtatcggctgttctattcctttcccaggggacgtcgggcaggtcgttttaatctattttac
tttaccctttctttcctacgaaacttttacttgaacaaaatgctgtctgcccgcaaaccgttcgctcagcttaacgagaacgtttctcccatgaagaacc
tgaccctggcagagaaagagaatacgccgccttcccttaacagcacccgagtcctggccagcaagaccgcccgtaacatcttccaggaggcagaaacgac
taagtcaaaagcgccaaaggatcctagaattcaggatgagccccttctgaaggataatccacatagatttgtgatcttccccattcagtatcatgatatc
tggcaaatgtacaagaaagcagaagcttcattctggactgctgaggaggtcgatttgtctaaggaccttcggcactgggaatccctgaaggcagaagaaa
aatacttcatctctcatgtgttggccttttttgcagccagtgatggaatagtaaatgagaacctggtggagcggtttagcaaagaagtgcaagttacaga
ggctcgctgctnttatggcttccaaattgcaatggagaatattcattctgagatgtacagccttcttattgacacctacatcaaagatccccaaagaaag
ggaatacctcttttaatgctattggaaactctgcctttgtgtgaaaaaagagagcttgactgggcttctgcgctggnaattggtgacaaaacaagcaacc
ttatggttgaacgaantgggtgggcattttgcctgcctgtttgaaagggaaattttcttccttctgggnttcaatttggcattcaaattttttctgggct
aaaaagaaaaacagggggggcctgattgtcta
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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