Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
EMBO J
2006 Mar 08;255:1160-74. doi: 10.1038/sj.emboj.7601014.
Show Gene links
Show Anatomy links
Large-scale identification of genes implicated in kidneyglomerulus development and function.
Takemoto M
,
He L
,
Norlin J
,
Patrakka J
,
Xiao Z
,
Petrova T
,
Bondjers C
,
Asp J
,
Wallgard E
,
Sun Y
,
Samuelsson T
,
Mostad P
,
Lundin S
,
Miura N
,
Sado Y
,
Alitalo K
,
Quaggin SE
,
Tryggvason K
,
Betsholtz C
.
???displayArticle.abstract???
To advance our understanding of development, function and diseases in the kidneyglomerulus, we have established and large-scale sequenced cDNA libraries from mouse glomeruli at different stages of development, resulting in a catalogue of 6053 different genes. The glomerular cDNA clones were arrayed and hybridized against a series of labeled targets from isolated glomeruli, non-glomerular kidneytissue, FACS-sorted podocytes and brain capillaries, which identified over 300 glomerular cell-enriched transcripts, some of which were further sublocalized to podocytes, mesangial cells and juxtaglomerular cells by in situ hybridization. For the earliest podocyte marker identified, Foxc2, knockout mice were used to analyze the role of this protein during glomerular development. We show that Foxc2 controls the expression of a distinct set of podocyte genes involved in podocyte differentiation and glomerular basement membrane maturation. The primary podocyte defects also cause abnormal differentiation and organization of the glomerular vascular cells. We surmise that studies on the other novel glomerulus-enriched transcripts identified in this study will provide new insight into glomerular development and pathomechanisms of disease.
Baelde,
Gene expression profiling in glomeruli from human kidneys with diabetic nephropathy.
2004, Pubmed
Baelde,
Gene expression profiling in glomeruli from human kidneys with diabetic nephropathy.
2004,
Pubmed
Barker,
Identification of mutations in the COL4A5 collagen gene in Alport syndrome.
1990,
Pubmed
Belteki,
Conditional and inducible transgene expression in mice through the combinatorial use of Cre-mediated recombination and tetracycline induction.
2005,
Pubmed
Bjarnegård,
Endothelium-specific ablation of PDGFB leads to pericyte loss and glomerular, cardiac and placental abnormalities.
2004,
Pubmed
Boström,
PDGF-A signaling is a critical event in lung alveolar myofibroblast development and alveogenesis.
1996,
Pubmed
Boute,
NPHS2, encoding the glomerular protein podocin, is mutated in autosomal recessive steroid-resistant nephrotic syndrome.
2000,
Pubmed
Chabardès-Garonne,
A panoramic view of gene expression in the human kidney.
2003,
Pubmed
Chen,
Limb and kidney defects in Lmx1b mutant mice suggest an involvement of LMX1B in human nail patella syndrome.
1998,
Pubmed
Cui,
Pod1 is required in stromal cells for glomerulogenesis.
2003,
Pubmed
Cui,
Rapid isolation of glomeruli coupled with gene expression profiling identifies downstream targets in Pod1 knockout mice.
2005,
Pubmed
Deen,
What determines glomerular capillary permeability?
2004,
Pubmed
Doyonnas,
Anuria, omphalocele, and perinatal lethality in mice lacking the CD34-related protein podocalyxin.
2001,
Pubmed
Dreyer,
Mutations in LMX1B cause abnormal skeletal patterning and renal dysplasia in nail patella syndrome.
1998,
Pubmed
Elalouf,
Renal transcriptomes: segmental analysis of differential expression.
2002,
Pubmed
Enge,
Endothelium-specific platelet-derived growth factor-B ablation mimics diabetic retinopathy.
2002,
Pubmed
Eremina,
Glomerular-specific gene excision in vivo.
2002,
Pubmed
Gross,
DDR1-deficient mice show localized subepithelial GBM thickening with focal loss of slit diaphragms and proteinuria.
2004,
Pubmed
Higgins,
Gene expression in the normal adult human kidney assessed by complementary DNA microarray.
2004,
Pubmed
Iida,
Essential roles of the winged helix transcription factor MFH-1 in aortic arch patterning and skeletogenesis.
1997,
Pubmed
Inoue,
FAT is a component of glomerular slit diaphragms.
2001,
Pubmed
Kaplan,
Mutations in ACTN4, encoding alpha-actinin-4, cause familial focal segmental glomerulosclerosis.
2000,
Pubmed
Kershaw,
Molecular cloning and characterization of human podocalyxin-like protein. Orthologous relationship to rabbit PCLP1 and rat podocalyxin.
1997,
Pubmed
Kestilä,
Positionally cloned gene for a novel glomerular protein--nephrin--is mutated in congenital nephrotic syndrome.
1998,
Pubmed
Kikkawa,
Mesangial cells organize the glomerular capillaries by adhering to the G domain of laminin alpha5 in the glomerular basement membrane.
2003,
Pubmed
Kim,
CD2-associated protein haploinsufficiency is linked to glomerular disease susceptibility.
2003,
Pubmed
Klamt,
Frasier syndrome is caused by defective alternative splicing of WT1 leading to an altered ratio of WT1 +/-KTS splice isoforms.
1998,
Pubmed
Kos,
Mice deficient in alpha-actinin-4 have severe glomerular disease.
2003,
Pubmed
Kreidberg,
Alpha 3 beta 1 integrin has a crucial role in kidney and lung organogenesis.
1996,
Pubmed
Kreidberg,
Podocyte differentiation and glomerulogenesis.
2003,
Pubmed
Kume,
The murine winged helix transcription factors, Foxc1 and Foxc2, are both required for cardiovascular development and somitogenesis.
2001,
Pubmed
Kume,
Murine forkhead/winged helix genes Foxc1 (Mf1) and Foxc2 (Mfh1) are required for the early organogenesis of the kidney and urinary tract.
2000,
Pubmed
Lahdenkari,
Podocytes are firmly attached to glomerular basement membrane in kidneys with heavy proteinuria.
2004,
Pubmed
Levéen,
Mice deficient for PDGF B show renal, cardiovascular, and hematological abnormalities.
1994,
Pubmed
Lindahl,
Paracrine PDGF-B/PDGF-Rbeta signaling controls mesangial cell development in kidney glomeruli.
1998,
Pubmed
Liu,
Neph1 and nephrin interaction in the slit diaphragm is an important determinant of glomerular permeability.
2003,
Pubmed
Lu,
Insertional mutation of the collagen genes Col4a3 and Col4a4 in a mouse model of Alport syndrome.
1999,
Pubmed
Miner,
Transcriptional induction of slit diaphragm genes by Lmx1b is required in podocyte differentiation.
2002,
Pubmed
Miner,
Molecular and functional defects in kidneys of mice lacking collagen alpha 3(IV): implications for Alport syndrome.
1996,
Pubmed
Miura,
MFH-1, a new member of the fork head domain family, is expressed in developing mesenchyme.
1993,
Pubmed
Mochizuki,
Identification of mutations in the alpha 3(IV) and alpha 4(IV) collagen genes in autosomal recessive Alport syndrome.
1994,
Pubmed
Morello,
Regulation of glomerular basement membrane collagen expression by LMX1B contributes to renal disease in nail patella syndrome.
2001,
Pubmed
Peterson,
Characterization of heterogeneity in the molecular pathogenesis of lupus nephritis from transcriptional profiles of laser-captured glomeruli.
2004,
Pubmed
Petrova,
Defective valves and abnormal mural cell recruitment underlie lymphatic vascular failure in lymphedema distichiasis.
2004,
Pubmed
Putaala,
The murine nephrin gene is specifically expressed in kidney, brain and pancreas: inactivation of the gene leads to massive proteinuria and neonatal death.
2001,
Pubmed
Rodewald,
Porous substructure of the glomerular slit diaphragm in the rat and mouse.
1974,
Pubmed
Rohr,
The LIM-homeodomain transcription factor Lmx1b plays a crucial role in podocytes.
2002,
Pubmed
Roselli,
Early glomerular filtration defect and severe renal disease in podocin-deficient mice.
2004,
Pubmed
Sadl,
The mouse Kreisler (Krml1/MafB) segmentation gene is required for differentiation of glomerular visceral epithelial cells.
2002,
Pubmed
Sadlier,
Sequential extracellular matrix-focused and baited-global cluster analysis of serial transcriptomic profiles identifies candidate modulators of renal tubulointerstitial fibrosis in murine adriamycin-induced nephropathy.
2004,
Pubmed
Sarwal,
Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling.
2003,
Pubmed
Shih,
Congenital nephrotic syndrome in mice lacking CD2-associated protein.
1999,
Pubmed
Smyth,
Linear models and empirical bayes methods for assessing differential expression in microarray experiments.
2004,
Pubmed
Soares,
Construction and characterization of a normalized cDNA library.
1994,
Pubmed
Somlo,
Getting a foothold in nephrotic syndrome.
2000,
Pubmed
Soriano,
Abnormal kidney development and hematological disorders in PDGF beta-receptor mutant mice.
1994,
Pubmed
Susztak,
Molecular profiling of diabetic mouse kidney reveals novel genes linked to glomerular disease.
2004,
Pubmed
Takemoto,
A new method for large scale isolation of kidney glomeruli from mice.
2002,
Pubmed
Tomari,
Glomerular differentiation in p27 and p57 double-mutant metanephroi.
2002,
Pubmed
Tsukaguchi,
NPHS2 mutations in late-onset focal segmental glomerulosclerosis: R229Q is a common disease-associated allele.
2002,
Pubmed
Virlon,
Serial microanalysis of renal transcriptomes.
1999,
Pubmed
Wada,
Gene expression profile in streptozotocin-induced diabetic mice kidneys undergoing glomerulosclerosis.
2001,
Pubmed
Wartiovaara,
Nephrin strands contribute to a porous slit diaphragm scaffold as revealed by electron tomography.
2004,
Pubmed
Watanabe,
Protein kinase N (PKN) and PKN-related protein rhophilin as targets of small GTPase Rho.
1996,
Pubmed
Wilson,
Microarray analysis of gene expression in the kidneys of new- and post-onset diabetic NOD mice.
2003,
Pubmed
Yildirim-Toruner,
A novel frameshift mutation of FOXC2 gene in a family with hereditary lymphedema-distichiasis syndrome associated with renal disease and diabetes mellitus.
2004,
Pubmed
Yin,
The essential role of Cited2, a negative regulator for HIF-1alpha, in heart development and neurulation.
2002,
Pubmed
Zenker,
Human laminin beta2 deficiency causes congenital nephrosis with mesangial sclerosis and distinct eye abnormalities.
2004,
Pubmed