Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
J Biol Chem
2006 Dec 08;28149:38071-9. doi: 10.1074/jbc.M608834200.
Show Gene links
Show Anatomy links
A three-dimensional model of human organic anion transporter 1: aromatic amino acids required for substrate transport.
Perry JL
,
Dembla-Rajpal N
,
Hall LA
,
Pritchard JB
.
???displayArticle.abstract???
Organic anion transporters (OATs) play a critical role in the handling of endogenous and exogenous organic anions by excretory and barrier tissues. Little is known about the OAT three-dimensional structure or substrate/protein interactions involved in transport. In this investigation, a theoretical three-dimensional model was generated for human OAT1 (hOAT1) based on fold recognition to the crystal structure of the glycerol 3-phosphate transporter (GlpT) from Escherichia coli. GlpT and hOAT1 share several sequence motifs as major facilitator superfamily members. The structural hOAT1 model shows that helices 5, 7, 8, 10, and 11 surround an electronegative putative active site ( approximately 830A(3)). The site opens to the cytoplasm and is surrounded by three residues not previously examined for function (Tyr(230) (domain 5) and Lys(431) and Phe(438) (domain 10)). Effects of these residues on p-aminohippurate (PAH) and cidofovir transport were assessed by point mutations in a Xenopus oocyte expression system. Membrane protein expression was severely limited for the Y230A mutant. For the K431A and F438A mutants, [(3)H]PAH uptake was less than 30% of wild-type hOAT1 uptake after protein expression correction. Reduced V(max) values for the F438A mutant confirmed lower protein expression. In addition, the F438A mutant exhibited an increased affinity for cidofovir but was not significantly different for PAH. Differences in handling of PAH and cidofovir were also observed for the Y230F mutant. Little uptake was determined for cidofovir, whereas PAH uptake was similar to wild-type hOAT1. Therefore, the hOAT1 structural model has identified two new residues, Tyr(230) and Phe(438), which are important for substrate/protein interactions.
Abramson,
Structure and mechanism of the lactose permease of Escherichia coli.
2003, Pubmed
Abramson,
Structure and mechanism of the lactose permease of Escherichia coli.
2003,
Pubmed
Bleasby,
Functional consequences of single nucleotide polymorphisms in the human organic anion transporter hOAT1 (SLC22A6).
2005,
Pubmed
,
Xenbase
Brady,
Fast prediction and visualization of protein binding pockets with PASS.
2000,
Pubmed
Burckhardt,
Transport of organic anions across the basolateral membrane of proximal tubule cells.
2003,
Pubmed
Burckhardt,
Structure of renal organic anion and cation transporters.
2000,
Pubmed
Eraly,
The molecular pharmacology of organic anion transporters: from DNA to FDA?
2004,
Pubmed
Feng,
Arginine 454 and lysine 370 are essential for the anion specificity of the organic anion transporter, rOAT3.
2001,
Pubmed
,
Xenbase
Feng,
Role of aromatic transmembrane residues of the organic anion transporter, rOAT3, in substrate recognition.
2002,
Pubmed
,
Xenbase
Finidori,
Adenylate cyclase in Xenopus laevis oocytes: characterization of the progesterone-sensitive, membrane-bound form.
1982,
Pubmed
,
Xenbase
Fiser,
Modeling of loops in protein structures.
2000,
Pubmed
Fritzsch,
Anion transport through the contraluminal cell membrane of renal proximal tubule. The influence of hydrophobicity and molecular charge distribution on the inhibitory activity of organic anions.
1989,
Pubmed
Ginalski,
3D-Jury: a simple approach to improve protein structure predictions.
2003,
Pubmed
Gorboulev,
Subtype-specific affinity for corticosterone of rat organic cation transporters rOCT1 and rOCT2 depends on three amino acids within the substrate binding region.
2005,
Pubmed
,
Xenbase
Griffith,
Membrane transport proteins: implications of sequence comparisons.
1992,
Pubmed
Guex,
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.
1997,
Pubmed
Hilbert,
Structural relationships of homologous proteins as a fundamental principle in homology modeling.
1993,
Pubmed
Hong,
Critical amino acid residues in transmembrane domain 1 of the human organic anion transporter hOAT1.
2004,
Pubmed
Huang,
Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli.
2003,
Pubmed
Maiden,
Mammalian and bacterial sugar transport proteins are homologous.
,
Pubmed
Marger,
A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport.
1993,
Pubmed
Martí-Renom,
Comparative protein structure modeling of genes and genomes.
2000,
Pubmed
Pao,
Major facilitator superfamily.
1998,
Pubmed
Popp,
Amino acids critical for substrate affinity of rat organic cation transporter 1 line the substrate binding region in a model derived from the tertiary structure of lactose permease.
2005,
Pubmed
,
Xenbase
Pritchard,
Mechanisms mediating renal secretion of organic anions and cations.
1993,
Pubmed
Rost,
Prediction of protein secondary structure at better than 70% accuracy.
1993,
Pubmed
Salas-Burgos,
Predicting the three-dimensional structure of the human facilitative glucose transporter glut1 by a novel evolutionary homology strategy: insights on the molecular mechanism of substrate migration, and binding sites for glucose and inhibitory molecules.
2004,
Pubmed
Sali,
Comparative protein modelling by satisfaction of spatial restraints.
1993,
Pubmed
Schömig,
Molecular cloning and characterization of two novel transport proteins from rat kidney.
1998,
Pubmed
Sweet,
Expression cloning and characterization of ROAT1. The basolateral organic anion transporter in rat kidney.
1997,
Pubmed
,
Xenbase
Sweet,
The molecular biology of renal organic anion and organic cation transporters.
1999,
Pubmed
Tanaka,
Cysteine residues in the organic anion transporter mOAT1.
2004,
Pubmed
Tanaka,
Role of glycosylation in the organic anion transporter OAT1.
2004,
Pubmed
Ullrich,
Renal transporters for organic anions and organic cations. Structural requirements for substrates.
1997,
Pubmed
Uwai,
Functional characterization of the rat multispecific organic anion transporter OAT1 mediating basolateral uptake of anionic drugs in the kidney.
1998,
Pubmed
,
Xenbase
Werten,
Progress in the analysis of membrane protein structure and function.
2002,
Pubmed
Wolff,
Cationic amino acids involved in dicarboxylate binding of the flounder renal organic anion transporter.
2001,
Pubmed
,
Xenbase
Wright,
Molecular and cellular physiology of renal organic cation and anion transport.
2004,
Pubmed
Zhang,
A conserved glutamate residue in transmembrane helix 10 influences substrate specificity of rabbit OCT2 (SLC22A2).
2005,
Pubmed
Zhou,
The role of glycine residues in the function of human organic anion transporter 4.
2004,
Pubmed
Zhou,
The role of N-linked glycosylation in protein folding, membrane targeting, and substrate binding of human organic anion transporter hOAT4.
2005,
Pubmed
Zhou,
Mutational analysis of histidine residues in human organic anion transporter 4 (hOAT4).
2004,
Pubmed