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Heredity (Edinb)
2016 Feb 01;1162:177-81. doi: 10.1038/hdy.2015.83.
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High-density sex-specific linkage maps of a European tree frog (Hyla arborea) identify the sex chromosome without information on offspring sex.
Brelsford A
,
Dufresnes C
,
Perrin N
.
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Identifying homology between sex chromosomes of different species is essential to understanding the evolution of sex determination. Here, we show that the identity of a homomorphic sex chromosome pair can be established using a linkage map, without information on offspring sex. By comparing sex-specific maps of the European tree frog Hyla arborea, we find that the sex chromosome (linkage group 1) shows a threefold difference in marker number between the male and female maps. In contrast, the number of markers on each autosome is similar between the two maps. We also find strongly conserved synteny between H. arborea and Xenopus tropicalis across 200 million years of evolution, suggesting that the rate of chromosomal rearrangement in anurans is low. Finally, we show that recombination in males is greatly reduced at the centers of large chromosomes, consistent with previous cytogenetic findings. Our research shows the importance of high-density linkage maps for studies of recombination, chromosomal rearrangement and the genetic architecture of ecologically or economically important traits.
Aris-Brosou,
Effects of models of rate evolution on estimation of divergence dates with special reference to the metazoan 18S ribosomal RNA phylogeny.
2002, Pubmed
Aris-Brosou,
Effects of models of rate evolution on estimation of divergence dates with special reference to the metazoan 18S ribosomal RNA phylogeny.
2002,
Pubmed
Bachtrog,
Y-chromosome evolution: emerging insights into processes of Y-chromosome degeneration.
2013,
Pubmed
Berset-Brändli,
Extreme heterochiasmy and nascent sex chromosomes in European tree frogs.
2008,
Pubmed
Brelsford,
Homologous sex chromosomes in three deeply divergent anuran species.
2013,
Pubmed
,
Xenbase
Cano,
First-generation linkage map for the common frog Rana temporaria reveals sex-linkage group.
2011,
Pubmed
Catchen,
Stacks: an analysis tool set for population genomics.
2013,
Pubmed
Chen,
Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle.
2014,
Pubmed
Cutter,
Genomic signatures of selection at linked sites: unifying the disparity among species.
2013,
Pubmed
Danecek,
The variant call format and VCFtools.
2011,
Pubmed
Dufresnes,
First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species.
2014,
Pubmed
,
Xenbase
Dufresnes,
Sex-chromosome differentiation parallels postglacial range expansion in European tree frogs (Hyla arborea).
2014,
Pubmed
Gadau,
A linkage analysis of sex determination in Bombus terrestris (L.) (Hymenoptera: Apidae).
2001,
Pubmed
Gamble,
Anolis sex chromosomes are derived from a single ancestral pair.
2014,
Pubmed
Gamble,
Identification of sex-specific molecular markers using restriction site-associated DNA sequencing.
2014,
Pubmed
Griffin,
The evolution of the avian genome as revealed by comparative molecular cytogenetics.
2007,
Pubmed
Langmead,
Fast gapped-read alignment with Bowtie 2.
2012,
Pubmed
Li,
The Sequence Alignment/Map format and SAMtools.
2009,
Pubmed
Mank,
The evolution of heterochiasmy: the role of sexual selection and sperm competition in determining sex-specific recombination rates in eutherian mammals.
2009,
Pubmed
Marshall Graves,
Are homologies in vertebrate sex determination due to shared ancestry or to limited options?
2010,
Pubmed
Miura,
An evolutionary witness: the frog rana rugosa underwent change of heterogametic sex from XY male to ZW female.
2007,
Pubmed
Nanda,
Sex chromosome polymorphism in guppies.
2014,
Pubmed
O'Meally,
Are some chromosomes particularly good at sex? Insights from amniotes.
2012,
Pubmed
Parchman,
Genome-wide association genetics of an adaptive trait in lodgepole pine.
2012,
Pubmed
Pease,
Sex chromosomes evolved from independent ancestral linkage groups in winged insects.
2012,
Pubmed
Perrin,
Sex reversal: a fountain of youth for sex chromosomes?
2009,
Pubmed
Peterson,
Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species.
2012,
Pubmed
Purcell,
Convergent genetic architecture underlies social organization in ants.
2014,
Pubmed
Rodrigues,
Within-population polymorphism of sex-determination systems in the common frog (Rana temporaria).
2013,
Pubmed
Srikulnath,
Identification of the linkage group of the Z sex chromosomes of the sand lizard (Lacerta agilis, Lacertidae) and elucidation of karyotype evolution in lacertid lizards.
2014,
Pubmed
Stapley,
A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution.
2008,
Pubmed
Stöck,
Low rates of X-Y recombination, not turnovers, account for homomorphic sex chromosomes in several diploid species of Palearctic green toads (Bufo viridis subgroup).
2013,
Pubmed
Stöck,
Ever-young sex chromosomes in European tree frogs.
2011,
Pubmed
Sumida,
A pronounced sex difference when two linked loci of the Japanese brown frog Rana japonica are recombined.
1994,
Pubmed
Sun,
Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes.
2015,
Pubmed
,
Xenbase
Wells,
A genetic map of Xenopus tropicalis.
2011,
Pubmed
,
Xenbase
Wiens,
Global patterns of diversification and species richness in amphibians.
2007,
Pubmed
Wu,
Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graph.
2008,
Pubmed