Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
Environ Sci Technol
2015 Jun 02;4911:6993-7001. doi: 10.1021/acs.est.5b01299.
Show Gene links
Show Anatomy links
An Aryl Hydrocarbon Receptor from the Salamander Ambystoma mexicanum Exhibits Low Sensitivity to 2,3,7,8-Tetrachlorodibenzo-p-dioxin.
Shoots J
,
Fraccalvieri D
,
Franks DG
,
Denison MS
,
Hahn ME
,
Bonati L
,
Powell WH
.
???displayArticle.abstract???
Structural features of the aryl hydrocarbon receptor (AHR) can underlie species- and population-specific differences in its affinity for 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). These differences often explain variations in TCDD toxicity. Frogs are relatively insensitive to dioxin, and Xenopus AHRs bind TCDD with low affinity. Weak TCDD binding results from the combination of three residues in the ligand-binding domain: A354 and A370, and N325. Here we sought to determine whether this mechanism of weak TCDD binding is shared by other amphibian AHRs. We isolated an AHR cDNA from the Mexican axolotl (Ambystoma mexicanum). The encoded polypeptide contains identical residues at positions that confer low TCDD affinity to X. laevis AHRs (A364, A380, and N335), and homology modeling predicts they protrude into the binding cavity. Axolotl AHR bound one-tenth the TCDD of mouse AHR in velocity sedimentation analysis, and in transactivation assays, the EC50 for TCDD was 23 nM, similar to X. laevis AHR1β (27 nM) and greater than AHR containing the mouse ligand-binding domain (0.08 nM). Sequence, modeled structure, and function indicate that axolotl AHR binds TCDD weakly, predicting that A. mexicanum lacks sensitivity toTCDD toxicity. We hypothesize that this characteristic of axolotl and Xenopus AHRs arose in a common ancestor of the Caudata and Anura.
Andersen,
Continuum secondary structure captures protein flexibility.
2002, Pubmed
Andersen,
Continuum secondary structure captures protein flexibility.
2002,
Pubmed
Andreasen,
Tissue-specific expression of AHR2, ARNT2, and CYP1A in zebrafish embryos and larvae: effects of developmental stage and 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure.
2002,
Pubmed
Beatty,
Toxicity of 2, 3, 7, 8-tetrachlorodibenzo-p-dioxin in larval and adult forms of Rana catesbeiana.
1976,
Pubmed
Beischlag,
The aryl hydrocarbon receptor complex and the control of gene expression.
2008,
Pubmed
Birnbaum,
Differential toxicity of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in C57BL/6J mice congenic at the Ah Locus.
1990,
Pubmed
Brockes,
Amphibian limb regeneration: rebuilding a complex structure.
1997,
Pubmed
Carlson,
A dynamic role for the Ah receptor in cell signaling? Insights from a diverse group of Ah receptor interacting proteins.
2002,
Pubmed
Collier,
The effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) on the mortality and growth of two amphibian species (Xenopus laevis and Pseudacris triseriata).
2008,
Pubmed
,
Xenbase
Denison,
Exactly the same but different: promiscuity and diversity in the molecular mechanisms of action of the aryl hydrocarbon (dioxin) receptor.
2011,
Pubmed
Dundas,
CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues.
2006,
Pubmed
Ema,
Dioxin binding activities of polymorphic forms of mouse and human arylhydrocarbon receptors.
1994,
Pubmed
Farmahin,
Sensitivity of avian species to the aryl hydrocarbon receptor ligand 6-formylindolo [3,2-b] carbazole (FICZ).
2014,
Pubmed
Farmahin,
Amino acid sequence of the ligand-binding domain of the aryl hydrocarbon receptor 1 predicts sensitivity of wild birds to effects of dioxin-like compounds.
2013,
Pubmed
Farmahin,
Sequence and in vitro function of chicken, ring-necked pheasant, and Japanese quail AHR1 predict in vivo sensitivity to dioxins.
2012,
Pubmed
Fernandez-Salguero,
Aryl-hydrocarbon receptor-deficient mice are resistant to 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced toxicity.
1996,
Pubmed
Fiser,
Modeling of loops in protein structures.
2000,
Pubmed
Fraccalvieri,
Comparative analysis of homology models of the AH receptor ligand binding domain: verification of structure-function predictions by site-directed mutagenesis of a nonfunctional receptor.
2013,
Pubmed
Frueh,
Use of cDNA microarrays to analyze dioxin-induced changes in human liver gene expression.
2001,
Pubmed
Fukunaga,
Identification of functional domains of the aryl hydrocarbon receptor.
1995,
Pubmed
Goldsmith,
The Convention on International Trade in Endangered Species of Wild Fauna and Flora.
1979,
Pubmed
Gresens,
An introduction to the Mexican axolotl (Ambystoma mexicanum).
2004,
Pubmed
Hahn,
Molecular evolution of two vertebrate aryl hydrocarbon (dioxin) receptors (AHR1 and AHR2) and the PAS family.
1997,
Pubmed
Hahn,
Evolutionary conservation of the vertebrate Ah (dioxin) receptor: amplification and sequencing of the PAS domain of a teleost Ah receptor cDNA.
1995,
Pubmed
Hahn,
Unexpected diversity of aryl hydrocarbon receptors in non-mammalian vertebrates: insights from comparative genomics.
2006,
Pubmed
Head,
Key amino acids in the aryl hydrocarbon receptor predict dioxin sensitivity in avian species.
2008,
Pubmed
Helbing,
The metamorphosis of amphibian toxicogenomics.
2012,
Pubmed
,
Xenbase
Henry,
Early life stage toxicity of 2,3,7,8-tetrachlorodibenzo-p-dioxin in zebrafish (Danio rerio).
1997,
Pubmed
Karchner,
Towards molecular understanding of species differences in dioxin sensitivity: initial characterization of Ah receptor cDNAs in birds and an amphibian.
2000,
Pubmed
Karchner,
AHR1B, a new functional aryl hydrocarbon receptor in zebrafish: tandem arrangement of ahr1b and ahr2 genes.
2005,
Pubmed
Karchner,
The molecular basis for differential dioxin sensitivity in birds: role of the aryl hydrocarbon receptor.
2006,
Pubmed
Larkin,
Clustal W and Clustal X version 2.0.
2007,
Pubmed
Laub,
Responsiveness of a Xenopus laevis cell line to the aryl hydrocarbon receptor ligands 6-formylindolo[3,2-b]carbazole (FICZ) and 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD).
2010,
Pubmed
,
Xenbase
Lavine,
Aryl hydrocarbon receptors in the frog Xenopus laevis: two AhR1 paralogs exhibit low affinity for 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD).
2005,
Pubmed
,
Xenbase
Lin,
Role of the aryl hydrocarbon receptor in the development of control and 2,3,7,8-tetrachlorodibenzo-p-dioxin-exposed male mice.
2001,
Pubmed
Long,
Protein kinase C activity is required for aryl hydrocarbon receptor pathway-mediated signal transduction.
1998,
Pubmed
Long,
Protein kinase C modulates aryl hydrocarbon receptor nuclear translocator protein-mediated transactivation potential in a dimer context.
1999,
Pubmed
Martí-Renom,
Comparative protein structure modeling of genes and genomes.
2000,
Pubmed
McIntosh,
Mammalian Per-Arnt-Sim proteins in environmental adaptation.
2010,
Pubmed
Mimura,
Loss of teratogenic response to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in mice lacking the Ah (dioxin) receptor.
1997,
Pubmed
Nebert,
Role of the aromatic hydrocarbon receptor and [Ah] gene battery in the oxidative stress response, cell cycle control, and apoptosis.
2000,
Pubmed
Odio,
Specific ligand binding domain residues confer low dioxin responsiveness to AHR1β of Xenopus laevis.
2013,
Pubmed
,
Xenbase
Pandini,
Structural and functional characterization of the aryl hydrocarbon receptor ligand binding domain by homology modeling and mutational analysis.
2007,
Pubmed
Pandini,
Detection of the TCDD binding-fingerprint within the Ah receptor ligand binding domain by structurally driven mutagenesis and functional analysis.
2009,
Pubmed
Peters,
Amelioration of TCDD-induced teratogenesis in aryl hydrocarbon receptor (AhR)-null mice.
1999,
Pubmed
Petrulis,
The role of chaperone proteins in the aryl hydrocarbon receptor core complex.
2002,
Pubmed
Pezdirc,
PCB accumulation and tissue distribution in cave salamander (Proteus anguinus anguinus, Amphibia, Urodela) in the polluted karstic hinterland of the Krupa River, Slovenia.
2011,
Pubmed
Philips,
Developmental differences in elimination of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) during Xenopus laevis development.
2006,
Pubmed
,
Xenbase
Poland,
Analysis of the four alleles of the murine aryl hydrocarbon receptor.
1994,
Pubmed
Prasch,
Aryl hydrocarbon receptor 2 mediates 2,3,7,8-tetrachlorodibenzo-p-dioxin developmental toxicity in zebrafish.
2003,
Pubmed
Puga,
Ah receptor signals cross-talk with multiple developmental pathways.
2005,
Pubmed
Puga,
The transcriptional signature of dioxin in human hepatoma HepG2 cells.
2000,
Pubmed
Pyron,
A large-scale phylogeny of Amphibia including over 2800 species, and a revised classification of extant frogs, salamanders, and caecilians.
2011,
Pubmed
Ramadoss,
Use of 2-azido-3-[125I]iodo-7,8-dibromodibenzo-p-dioxin as a probe to determine the relative ligand affinity of human versus mouse aryl hydrocarbon receptor in cultured cells.
2004,
Pubmed
Saitou,
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
1987,
Pubmed
Sali,
Comparative protein modelling by satisfaction of spatial restraints.
1993,
Pubmed
San Mauro,
A multilocus timescale for the origin of extant amphibians.
2010,
Pubmed
Shen,
Statistical potential for assessment and prediction of protein structures.
2006,
Pubmed
Sippl,
Recognition of errors in three-dimensional structures of proteins.
1993,
Pubmed
Smith,
Sal-Site: integrating new and existing ambystomatid salamander research and informational resources.
2005,
Pubmed
Soshilov,
Ligand promiscuity of aryl hydrocarbon receptor agonists and antagonists revealed by site-directed mutagenesis.
2014,
Pubmed
Staples,
Thymic alterations induced by 2,3,7,8-tetrachlorodibenzo-p-dioxin are strictly dependent on aryl hydrocarbon receptor activation in hemopoietic cells.
1998,
Pubmed
Stuart,
Status and trends of amphibian declines and extinctions worldwide.
2004,
Pubmed
Vajda,
Effects of steroids and dioxin (2,3,7,8-TCDD) on the developing wolffian ducts of the tiger salamander (Ambystoma tigrinum).
2005,
Pubmed
Vences,
Multiple overseas dispersal in amphibians.
2003,
Pubmed
Wijnstekers,
The Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) - 35 Years of Global Efforts to Ensure That International Trade in Wild Animals and Plants Is Legal and Sustainable.
2011,
Pubmed
Wincent,
The suggested physiologic aryl hydrocarbon receptor activator and cytochrome P4501 substrate 6-formylindolo[3,2-b]carbazole is present in humans.
2009,
Pubmed
Zimmermann,
An aryl hydrocarbon receptor repressor from Xenopus laevis: function, expression, and role in dioxin responsiveness during frog development.
2008,
Pubmed
,
Xenbase