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Unlike mammals, Xenopus laevis tadpoles have a high regenerative potential. To characterize this regenerative response, we performed single-cell RNA sequencing after tail amputation. By comparing naturally occurring regeneration-competent and -incompetent tadpoles, we identified a previously unrecognized cell type, which we term the regeneration-organizing cell (ROC). ROCs are present in the epidermis during normal tail development and specifically relocalize to the amputation plane of regeneration-competent tadpoles, forming the wound epidermis. Genetic ablation or manual removal of ROCs blocks regeneration, whereas transplantation of ROC-containing grafts induces ectopic outgrowths in early embryos. Transcriptional profiling revealed that ROCs secrete ligands associated with key regenerative pathways, signaling to progenitors to reconstitute lost tissue. These findings reveal the cellular mechanism through which ROCs form the wound epidermis and ensure successful regeneration.
Aibar,
SCENIC: single-cell regulatory network inference and clustering.
2017, Pubmed
Aibar,
SCENIC: single-cell regulatory network inference and clustering.
2017,
Pubmed
Ashburner,
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
2000,
Pubmed
Beck,
Temporal requirement for bone morphogenetic proteins in regeneration of the tail and limb of Xenopus tadpoles.
2006,
Pubmed
,
Xenbase
Beck,
Molecular pathways needed for regeneration of spinal cord and muscle in a vertebrate.
2003,
Pubmed
,
Xenbase
Butler,
Integrating single-cell transcriptomic data across different conditions, technologies, and species.
2018,
Pubmed
Chen,
Neuron and microglia/macrophage-derived FGF10 activate neuronal FGFR2/PI3K/Akt signaling and inhibit microglia/macrophages TLR4/NF-κB-dependent neuroinflammation to improve functional recovery after spinal cord injury.
2017,
Pubmed
Chen,
Regeneration Genetics.
2017,
Pubmed
Curado,
Conditional targeted cell ablation in zebrafish: a new tool for regeneration studies.
2007,
Pubmed
Ferreira,
Early bioelectric activities mediate redox-modulated regeneration.
2016,
Pubmed
,
Xenbase
Ferreira,
Early redox activities modulate Xenopus tail regeneration.
2018,
Pubmed
,
Xenbase
Gargioli,
Cell lineage tracing during Xenopus tail regeneration.
2004,
Pubmed
,
Xenbase
Ho,
TGF-beta signaling is required for multiple processes during Xenopus tail regeneration.
2008,
Pubmed
,
Xenbase
Ilicic,
Classification of low quality cells from single-cell RNA-seq data.
2016,
Pubmed
Kang,
Modulation of tissue repair by regeneration enhancer elements.
2016,
Pubmed
Kawakami,
Sp8 and Sp9, two closely related buttonhead-like transcription factors, regulate Fgf8 expression and limb outgrowth in vertebrate embryos.
2004,
Pubmed
Kostakopoulou,
'Regeneration' of wing bud stumps of chick embryos and reactivation of Msx-1 and Shh expression in response to FGF-4 and ridge signals.
1996,
Pubmed
Li,
The cellular and molecular mechanisms of tissue repair and regeneration as revealed by studies in Xenopus.
2016,
Pubmed
,
Xenbase
Lin,
Requirement for Wnt and FGF signaling in Xenopus tadpole tail regeneration.
2008,
Pubmed
,
Xenbase
Lin,
Imparting regenerative capacity to limbs by progenitor cell transplantation.
2013,
Pubmed
,
Xenbase
Love,
pTransgenesis: a cross-species, modular transgenesis resource.
2011,
Pubmed
,
Xenbase
Love,
Genome-wide analysis of gene expression during Xenopus tropicalis tadpole tail regeneration.
2011,
Pubmed
,
Xenbase
Love,
Amputation-induced reactive oxygen species are required for successful Xenopus tadpole tail regeneration.
2013,
Pubmed
,
Xenbase
Lun,
A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.
2016,
Pubmed
Martinez-De Luna,
Rod-Specific Ablation Using the Nitroreductase/Metronidazole System to Investigate Regeneration in Xenopus.
2018,
Pubmed
,
Xenbase
Ogino,
High-throughput transgenesis in Xenopus using I-SceI meganuclease.
2006,
Pubmed
,
Xenbase
Pandey,
Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq.
2018,
Pubmed
Petit,
Limb development: a paradigm of gene regulation.
2017,
Pubmed
Ramilowski,
A draft network of ligand-receptor-mediated multicellular signalling in human.
2015,
Pubmed
Robinson,
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
2010,
Pubmed
Session,
Genome evolution in the allotetraploid frog Xenopus laevis.
2016,
Pubmed
,
Xenbase
Stoick-Cooper,
Advances in signaling in vertebrate regeneration as a prelude to regenerative medicine.
2007,
Pubmed
Sugiura,
Xenopus Wnt-5a induces an ectopic larval tail at injured site, suggesting a crucial role for noncanonical Wnt signal in tail regeneration.
2009,
Pubmed
,
Xenbase
Tanaka,
The Molecular and Cellular Choreography of Appendage Regeneration.
2016,
Pubmed
Taniguchi,
Spinal cord is required for proper regeneration of the tail in Xenopus tadpoles.
2008,
Pubmed
,
Xenbase
Tazaki,
Macroarray-based analysis of tail regeneration in Xenopus laevis larvae.
2005,
Pubmed
,
Xenbase
Tirosh,
Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq.
2016,
Pubmed
Tran,
Wnt/beta-catenin signaling is involved in the induction and maintenance of primitive hematopoiesis in the vertebrate embryo.
2010,
Pubmed
,
Xenbase
Yu,
BMP signaling induces digit regeneration in neonatal mice.
2010,
Pubmed