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XB-MORPHOLINO-17249693
Morpholino Name:
hey1 MO2
Synonyms: hey1-MO, hrt1 MO, XHRT1
Target mRNA: hey1
Morpholino Type: uncategorized morpholino
Sequence: 5' TAGTCGTGTCCCCGCTTCATGGCTG 3'
Source: Gene Tools LLC
Synonyms: hey1-MO, hrt1 MO, XHRT1
Target mRNA: hey1
Morpholino Type: uncategorized morpholino
Sequence: 5' TAGTCGTGTCCCCGCTTCATGGCTG 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||||
| Identities | 24/25 | 25/25 | 25/25 | ||||
genome
MO
|
5' CAGCCATGAAGCGGGGACACGATTA 3'
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3' GTCGGTACTTCGCCCCTGTGCTGAT 5' |
5' CAGCCATGAAGCGGGGACACGACTA 3' ||||||||||||||||||||||||| 3' GTCGGTACTTCGCCCCTGTGCTGAT 5' |
5' CAGCCATGAAGCGGGGACACGACTA 3' ||||||||||||||||||||||||| 3' GTCGGTACTTCGCCCCTGTGCTGAT 5' |
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Genomic Alignments  |
Position | Identity | Strand | Target | Target mRNA | ||
| laevis 10.1 | Chr6L:133084795..133084819 | 25/25 | Sense | target | hey1.L | ||
| Chr6S:109365845..109365869 | 25/25 | Sense | target | hey1.S | |||
| Chr1L:23394588..23394612 | 25/25 | Antisense | off-target | grk4.L | |||
| Chr4S:57441305..57441329 | 25/25 | Sense | off-target | phkb.S | |||
| Chr4S:57441861..57441885 | 25/25 | Antisense | off-target | phkb.S | |||
| Chr5L:132371632..132371656 | 25/25 | Sense | off-target | cul3.L | |||
| Chr5L:132372197..132372221 | 25/25 | Antisense | off-target | cul3.L | |||
| Chr5L:45981951..45981975 | 25/25 | Sense | off-target | utrn.L | |||
| Chr5L:45982514..45982538 | 25/25 | Antisense | off-target | utrn.L | |||
| Chr5S:107190986..107191010 | 25/25 | Antisense | off-target | xrn1.S | |||
| Chr1L:23394025..23394049 | 25/25 | Sense | off-target | grk4.L | |||
| Chr3S:124376779..124376803 | 25/25 | Sense | off-target | odad3.S | |||
| Chr3S:124377345..124377369 | 25/25 | Antisense | off-target | odad3.S | |||
| Chr4L:58165067..58165091 | 25/25 | Sense | off-target | plcg2.L | |||
| Chr4L:58165668..58165692 | 25/25 | Antisense | off-target | plcg2.L | |||
| Chr9_10L:105191600..105191624 | 25/25 | Sense | off-target | mad1l1.L | |||
| Chr2S:146770002..146770026 | 25/25 | Antisense | off-target | LOC108709955 | |||
| Chr2S:32524413..32524437 | 25/25 | Sense | off-target | LOC108709326 | |||
| Chr3L:63590545..63590569 | 25/25 | Antisense | off-target | LOC121401488 | |||
| Chr5L:58952124..58952148 | 25/25 | Sense | off-target | LOC101027285 | |||
| Chr8S:79243175..79243199 | 25/25 | Sense | off-target | LOC108700560 | |||
| Chr8S:79243688..79243712 | 25/25 | Antisense | off-target | LOC108700560 | |||
| Chr6S:36129884..36129908 | 25/25 | Sense | off-target | LOC108719941 | |||
| Chr2S:107690041..107690065 | 24/25 | Antisense | off-target | arhgef7.S | |||
| Chr2S:32525025..32525049 | 24/25 | Antisense | off-target | LOC108709326 | |||
| Chr7L:9259352..9259376 | 24/25 | Antisense | off-target | LOC108695740 | |||
| Chr1S:177604439..177604463 | 25/25 | Sense | unknown | ||||
| Chr2S:158565433..158565457 | 25/25 | Sense | unknown | ||||
| Chr2S:47335825..47335849 | 25/25 | Sense | unknown | ||||
| Chr3S:19211187..19211211 | 25/25 | Sense | unknown | ||||
| Chr4S:25237707..25237731 | 25/25 | Antisense | unknown | ||||
| Chr3S:19211788..19211812 | 24/25 | Antisense | unknown | ||||
| Chr8S:19611308..19611332 | 24/25 | Antisense | unknown | ||||
| Chr8S:69972704..69972728 | 24/25 | Antisense | unknown | ||||
| Chr7L:114208765..114208789 | 24/25 | Antisense | unknown | ||||
| Chr7L:68361254..68361278 | 24/25 | Sense | unknown | ||||
| Chr7L:68361870..68361894 | 23/25 | Antisense | unknown | ||||
| Chr6L:77885308..77885332 | 22/25 | Sense | unknown | tropicalis 10.0 | Chr6:123459198..123459222 | 24/25 | Sense | target | hey1 |
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
The Notch-effector HRT1 gene plays a role in glomerular development and patterning of the Xenopus pronephros anlagen., Development 2006  |
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| ???morpholino.displaySummary.papersRecent??? |
Notch signaling, wt1 and foxc2 are key regulators of the podocyte gene regulatory network in Xenopus., Development 2010  |
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| ???morpholino.displaySummary.papersAll??? | |||||||
