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Summary Attributions Wiki
XB-MORPHOLINO-17250003
Morpholino Name: nodal1 MO2
Synonyms: Xnr-1 MO-1, Xnr-1 MO1
Target mRNA: nodal1

Morpholino Type: uncategorized morpholino
Sequence: 5' ACAGGACTGCTGTCAGAAATGCCAT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 25/25 25/25
genome
MO
 
5' ATGGCATTTCTGACAGCAGTCCTGT 3'
   |||||||||||||||||||||||||
3' TACCGTAAAGACTGTCGTCAGGACA 5'
 
5' ATGGCATTTCTGACAGCAGTCCTGT 3'
   |||||||||||||||||||||||||
3' TACCGTAAAGACTGTCGTCAGGACA 5'
 
5' ATGGCATTTCTGACAGCAGTCCTGT 3'
   |||||||||||||||||||||||||
3' TACCGTAAAGACTGTCGTCAGGACA 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr3L:141534623..141534647 25/25 Antisense target nodal1.L
Chr3S:21251761..21251785 25/25 Sense target nodal1.S
Chr8S:57183795..57183819 23/25 Antisense off-target lamp2.S
Chr4S:58094386..58094410 21/25 Antisense off-target ddah1.S
Chr6L:34748812..34748836 21/25 Sense off-target nxph1.L
Chr8S:87150147..87150171 21/25 Antisense off-target plekhg2.S
Chr8L:28509009..28509033 21/25 Sense off-target LOC108698253
Chr8L:28581373..28581397 21/25 Sense off-target LOC121396931
Chr8L:28874257..28874281 21/25 Sense off-target LOC108705658
Chr8L:29002979..29003003 21/25 Sense off-target LOC121396951
Chr8L:29002979..29003003 21/25 Sense off-target LOC121396952
Chr8L:29124414..29124438 21/25 Sense off-target LOC121393141
Chr8L:28850021..28850045 21/25 Sense off-target LOC108705659
Chr4L:66399526..66399550 21/25 Sense off-target LOC108714133
Chr7S:60222757..60222781 21/25 Antisense unknown
Chr8L:28646877..28646901 21/25 Sense unknown
Chr8L:28717247..28717271 21/25 Sense unknown
Chr2S:127545795..127545819 21/25 Sense unknown
tropicalis 10.0 Chr3:132122716..132122740 25/25 Antisense target nodal1
Chr8:40811679..40811703 21/25 Sense off-target ngrn
Chr8:40811679..40811703 21/25 Sense off-target hsf3
Chr6:34752587..34752611 21/25 Sense off-target nxph1
Publications
???morpholino.displaySummary.papersFirst??? Xenopus nodal related-1 is indispensable only for left-right axis determination., Int J Dev Biol 2005     
???morpholino.displaySummary.papersRecent??? Distinct Xenopus Nodal ligands sequentially induce mesendoderm and control gastrulation movements in parallel to the Wnt/PCP pathway., Development 2010     
???morpholino.displaySummary.papersAll???