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XB-MORPHOLINO-17250196
Morpholino Name:
rara MO2
Synonyms: RAR_2.2 MO, Raralpha2.2:, xRAR 2, XRAR 2.2, xRARalpha2
Target mRNA: rara
Morpholino Type: uncategorized morpholino
Sequence: 5' ATCCAAAGGAAGGTGAGTGTGTGTG 3'
Source: Gene Tools LLC
Synonyms: RAR_2.2 MO, Raralpha2.2:, xRAR 2, XRAR 2.2, xRARalpha2
Target mRNA: rara
Morpholino Type: uncategorized morpholino
Sequence: 5' ATCCAAAGGAAGGTGAGTGTGTGTG 3'
Source: Gene Tools LLC
Target mRNA | laevis.L | ||||||
Identities | 25/25 | ||||||
genome
MO
|
5' CACACACACTCACCTTCCTTTGGAT 3' ||||||||||||||||||||||||| 3' GTGTGTGTGAGTGGAAGGAAACCTA 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Target mRNA | ||
laevis 10.1 | Chr9_10L:1666245..1666269 | 25/25 | Sense | target | rara.L | ||
Chr4S:110387341..110387365 | 21/25 | Sense | off-target | oxtr.S | |||
Chr8L:106502392..106502416 | 21/25 | Sense | off-target | npas3.L | |||
Chr3S:37038342..37038366 | 21/25 | Antisense | off-target | map2k1.S | |||
Chr1L:154230614..154230638 | 22/25 | Antisense | unknown | ||||
Chr8S:73260193..73260217 | 22/25 | Antisense | unknown | ||||
Chr1S:131441821..131441845 | 21/25 | Antisense | unknown | ||||
Chr7S:111563336..111563360 | 21/25 | Sense | unknown | ||||
Chr1L:12668696..12668720 | 21/25 | Antisense | unknown | tropicalis 10.0 | Chr4:131374445..131374469 | 21/25 | Sense | off-target | oxtr |
Chr7:75095905..75095929 | 21/25 | Sense | off-target | robo3 | |||
Chr1:142261338..142261362 | 22/25 | Antisense | unknown | ||||
Chr9:35520343..35520367 | 21/25 | Sense | unknown | ||||
Chr9:35512876..35512900 | 21/25 | Sense | unknown | ||||
Chr9:35512982..35513006 | 21/25 | Sense | unknown | ||||
Chr9:35513199..35513223 | 21/25 | Sense | unknown | ||||
Chr9:35515336..35515360 | 21/25 | Sense | unknown | ||||
Chr9:35516524..35516548 | 21/25 | Sense | unknown | ||||
Chr9:35517657..35517681 | 21/25 | Sense | unknown | ||||
Chr9:35518025..35518049 | 21/25 | Sense | unknown | ||||
Chr9:35518729..35518753 | 21/25 | Sense | unknown | ||||
Chr9:35519602..35519626 | 21/25 | Sense | unknown | ||||
Chr9:35503682..35503706 | 21/25 | Sense | unknown | ||||
Chr7:13328746..13328770 | 21/25 | Sense | unknown | ||||
Chr9:35504306..35504330 | 21/25 | Sense | unknown | ||||
Chr9:35506566..35506590 | 21/25 | Sense | unknown | ||||
Chr9:35507258..35507282 | 21/25 | Sense | unknown | ||||
Chr9:35509204..35509228 | 21/25 | Sense | unknown | ||||
Chr9:35510911..35510935 | 21/25 | Sense | unknown | ||||
Chr9:35511154..35511178 | 21/25 | Sense | unknown | ||||
Chr9:35511260..35511284 | 21/25 | Sense | unknown | ||||
Chr9:35511787..35511811 | 21/25 | Sense | unknown | ||||
Chr9:35512000..35512024 | 21/25 | Sense | unknown | ||||
Chr9:35512243..35512267 | 21/25 | Sense | unknown | ||||
Chr9:35512349..35512373 | 21/25 | Sense | unknown | ||||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
Active repression of RAR signaling is required for head formation., Genes Dev 2001 |
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???morpholino.displaySummary.papersRecent??? |
RARγ is required for mesodermal gene expression prior to gastrulation in Xenopus., Development 2018 |
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???morpholino.displaySummary.papersAll??? |