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Summary Attributions Wiki
XB-MORPHOLINO-17250260
Morpholino Name: rrad MO1
Synonyms: MO2, MO2 (1356-1380)
Target mRNA: rrad

Morpholino Type: uncategorized morpholino
Sequence: 5' AAAGTGCAATAACAAGTGAAAAAAA 3'

Source: Gene Tools LLC


Target mRNA laevis.L
Identities 22/25
genome
MO
 
5' TTTTTTTGAATTGTTATTGCACTTC 3'
   ||||||| | |||||||||||||| 
3' AAAAAAAGTGAACAATAACGTGAAA 5'
      
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr4L:61143957..61143981 22/25 Sense target rrad.L
Chr3L:32860313..32860337 25/25 Antisense off-target dnd1.L
Chr2L:163964062..163964086 22/25 Sense off-target LOC108708699
Chr5L:45846066..45846090 21/25 Sense off-target utrn.L
Chr5L:45847335..45847359 21/25 Antisense off-target utrn.L
Chr9_10L:92903028..92903052 21/25 Antisense off-target pth2r.L
Chr9_10S:92219923..92219947 21/25 Sense off-target elfn1.S
Chr9_10S:92220299..92220323 21/25 Antisense off-target elfn1.S
Chr1S:115843047..115843071 21/25 Sense off-target ptprd.S
Chr1S:115844558..115844582 21/25 Antisense off-target ptprd.S
Chr6L:40415454..40415478 21/25 Sense off-target dnah11.L
Chr6S:91005933..91005957 21/25 Antisense off-target ppp4r1.S
Chr4L:132711174..132711198 21/25 Antisense off-target cfap100.L
Chr9_10L:6394317..6394341 21/25 Sense off-target marchf10.L
Chr9_10L:6398272..6398296 21/25 Antisense off-target marchf10.L
Chr7S:73660120..73660144 21/25 Antisense off-target LOC121396041
Chr9_10L:92903028..92903052 21/25 Antisense off-target LOC108701479
Chr2S:80173045..80173069 21/25 Antisense off-target LOC108709590
Chr4L:143481032..143481056 21/25 Antisense off-target LOC108713590
Chr8S:23228221..23228245 22/25 Antisense unknown
Chr2L:54731850..54731874 22/25 Antisense unknown
Chr3S:95784127..95784151 22/25 Sense unknown
Chr3S:95786802..95786826 22/25 Antisense unknown
Chr5S:82648817..82648841 21/25 Sense unknown
Chr6S:134583288..134583312 21/25 Sense unknown
Chr6S:22450872..22450896 21/25 Antisense unknown
Chr7S:44501074..44501098 21/25 Antisense unknown
Chr8L:16337082..16337106 21/25 Antisense unknown
Chr8L:39330045..39330069 21/25 Sense unknown
Chr8L:39332063..39332087 21/25 Antisense unknown
Chr7S:44500149..44500173 21/25 Sense unknown
Chr1L:113758326..113758350 21/25 Sense unknown
Chr1L:93505635..93505659 21/25 Sense unknown
Chr1L:93507496..93507520 21/25 Antisense unknown
Chr1S:179031118..179031142 21/25 Sense unknown
Chr1S:179032478..179032502 21/25 Antisense unknown
Chr1S:6687506..6687530 21/25 Antisense unknown
Chr2L:38014370..38014394 21/25 Sense unknown
Chr2L:38015736..38015760 21/25 Antisense unknown
Chr2L:40766466..40766490 21/25 Sense unknown
Chr3L:94109909..94109933 21/25 Sense unknown
Chr3L:94111195..94111219 21/25 Antisense unknown
Chr4L:58046940..58046964 21/25 Sense unknown
Chr4L:58048179..58048203 21/25 Antisense unknown
Chr5L:40722883..40722907 21/25 Antisense unknown
tropicalis 10.0 Chr6:69816715..69816739 22/25 Sense off-target cmbl
Chr8:46526047..46526071 22/25 Sense off-target asb12
Chr8:140186097..140186121 22/25 Antisense off-target LOC100495229
Chr1:167670256..167670280 21/25 Antisense off-target fbn2
Chr2:66399858..66399882 21/25 Sense off-target grm4
Chr7:85257682..85257706 21/25 Sense off-target nnmt
Chr8:103660865..103660889 21/25 Sense off-target armh4
Chr8:28294736..28294760 21/25 Sense off-target wdr38
Chr2:89989490..89989514 21/25 Sense off-target clic4
Chr4:84180023..84180047 21/25 Antisense off-target pde4b
Chr5:98240728..98240752 21/25 Sense off-target csmd1
Chr6:58462859..58462883 21/25 Sense off-target sugct
Chr6:70854440..70854464 21/25 Antisense off-target dnah5
Chr6:73620581..73620605 21/25 Sense off-target chmp5
Chr9:64094156..64094180 21/25 Antisense off-target osbpl6
Chr1:172702891..172702915 21/25 Antisense off-target ythdc2
Chr8:119997066..119997090 21/25 Sense off-target zfyve26
Chr5:61395009..61395033 21/25 Sense off-target arfgef3
Chr4:100384405..100384429 21/25 Antisense off-target cacna1e
Chr7:89979059..89979083 21/25 Antisense off-target tnfrsf14
Chr7:94525921..94525945 21/25 Sense off-target LOC101734646
Chr7:94573967..94573991 21/25 Sense off-target LOC101733740
Chr7:94601825..94601849 21/25 Sense off-target LOC101734514
Chr7:94621369..94621393 21/25 Sense off-target LOC101734514
Chr8:123091354..123091378 21/25 Antisense off-target LOC100493820
Chr8:134044610..134044634 21/25 Antisense off-target LOC108644486
Chr9:34364154..34364178 21/25 Antisense off-target LOC105948488
Chr8:134044610..134044634 21/25 Antisense off-target LOC113455423
Chr1:866517..866541 21/25 Sense off-target LOC116408329
Chr5:155810483..155810507 21/25 Sense off-target LOC116411009
Chr7:76626499..76626523 21/25 Antisense off-target LOC116412031
Chr6:73163668..73163692 22/25 Antisense unknown
Chr6:73165031..73165055 22/25 Antisense unknown
Chr1:3327677..3327701 22/25 Sense unknown
Chr10:19178019..19178043 22/25 Sense unknown
Chr2:67148901..67148925 22/25 Sense unknown
Chr2:81473721..81473745 22/25 Sense unknown
Chr6:136943723..136943747 22/25 Antisense unknown
Chr6:46502306..46502330 22/25 Antisense unknown
Chr8:72706048..72706072 21/25 Antisense unknown
Chr9:41866354..41866378 21/25 Sense unknown
Chr1:141804007..141804031 21/25 Sense unknown
Chr1:182732644..182732668 21/25 Antisense unknown
Chr1:3262356..3262380 21/25 Sense unknown
Chr1:5127904..5127928 21/25 Sense unknown
Chr1:5153536..5153560 21/25 Sense unknown
Chr1:6443541..6443565 21/25 Sense unknown
Chr1:88595168..88595192 21/25 Antisense unknown
Chr2:62112077..62112101 21/25 Sense unknown
Chr2:64996331..64996355 21/25 Sense unknown
Chr3:116369139..116369163 21/25 Sense unknown
Chr3:45387036..45387060 21/25 Antisense unknown
Chr3:95698054..95698078 21/25 Antisense unknown
Chr4:47633733..47633757 21/25 Antisense unknown
Chr5:157956652..157956676 21/25 Antisense unknown
Chr5:29620666..29620690 21/25 Antisense unknown
Chr5:31124632..31124656 21/25 Sense unknown
Chr5:50338111..50338135 21/25 Sense unknown
Chr5:61237908..61237932 21/25 Antisense unknown
Chr5:68627311..68627335 21/25 Sense unknown
Chr6:113376318..113376342 21/25 Sense unknown
Chr6:144480619..144480643 21/25 Antisense unknown
Chr7:37451094..37451118 21/25 Sense unknown
Chr7:66846281..66846305 21/25 Sense unknown
Chr7:70033475..70033499 21/25 Sense unknown
Chr7:70349152..70349176 21/25 Sense unknown
Chr7:75843116..75843140 21/25 Antisense unknown
Chr7:76172316..76172340 21/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? Participation of Xenopus Elr-type proteins in vegetal mRNA localization during oogenesis., J Biol Chem 2009     
???morpholino.displaySummary.papersRecent??? Elr-type proteins protect Xenopus Dead end mRNA from miR-18-mediated clearance in the soma., Proc Natl Acad Sci U S A 2010     
???morpholino.displaySummary.papersAll???