Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Attributions Wiki
XB-MORPHOLINO-17250306
Morpholino Name: shroom2 MO1
Synonyms: Shroom2-SPL-MO
Target mRNA: shroom2

Morpholino Type: uncategorized morpholino
Sequence: 5' TACTACCATACACACCTTGACAAGT 3'

Source: Gene Tools LLC


Target mRNA laevis.L
Identities 25/25
genome
MO
 
5' ACTTGTCAAGGTGTGTATGGTAGTA 3'
   |||||||||||||||||||||||||
3' TGAACAGTTCCACACATACCATCAT 5'
      
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr2L:79702331..79702355 25/25 Antisense target shroom2.L
Chr4L:91162520..91162544 21/25 Sense off-target faf1.L
Chr4S:18786753..18786777 21/25 Antisense off-target sbf2.S
Chr6L:70306873..70306897 21/25 Antisense off-target sdha.L
Chr6L:9090286..9090310 21/25 Sense off-target nktr.L
Chr1L:98774460..98774484 21/25 Sense off-target noa1.L
Chr2L:61063617..61063641 21/25 Antisense off-target pigv.S
Chr2S:49770615..49770639 21/25 Sense off-target bcor.S
Chr3L:82766578..82766602 21/25 Sense off-target cog5.L
Chr3L:85827777..85827801 21/25 Sense off-target pclo.L
Chr3S:104846920..104846944 21/25 Antisense off-target drd1.S
Chr3S:15674687..15674711 21/25 Sense off-target tcof1.S
Chr4S:132673415..132673439 21/25 Antisense off-target nisch.S
Chr5S:128966390..128966414 21/25 Antisense off-target cyria.S
Chr7S:89351795..89351819 21/25 Sense off-target megf6.S
Chr8L:31007330..31007354 21/25 Antisense off-target eda2r.L
Chr1L:57016286..57016310 21/25 Antisense off-target pdgfc.L
Chr1L:19936980..19937004 21/25 Sense off-target ctbp1.L
Chr2L:105290297..105290321 21/25 Antisense off-target p2rx1.L
Chr8S:8344503..8344527 21/25 Sense off-target kcnh5.S
Chr9_10S:24806739..24806763 21/25 Antisense off-target usp36.S
Chr3S:55172172..55172196 21/25 Antisense off-target chrna7.S
Chr4L:116847279..116847303 21/25 Sense off-target lrrc52.L
Chr5S:29954432..29954456 21/25 Antisense off-target anapc1.S
Chr6S:13534496..13534520 21/25 Antisense off-target adarb2.S
Chr6S:3517547..3517571 21/25 Antisense off-target cdc25a.S
Chr8L:22528020..22528044 21/25 Antisense off-target brinp1.L
Chr2L:45573925..45573949 21/25 Sense off-target ptchd1.L
Chr8S:58499202..58499226 21/25 Antisense off-target chrdl1.S
Chr8S:58499546..58499570 21/25 Sense off-target chrdl1.S
Chr8S:58500312..58500336 21/25 Sense off-target chrdl1.S
Chr9_10L:20525714..20525738 21/25 Antisense off-target kcnj16.L
Chr9_10L:20526019..20526043 21/25 Sense off-target kcnj16.L
Chr9_10L:20526785..20526809 21/25 Sense off-target kcnj16.L
Chr6L:5703970..5703994 21/25 Sense off-target smarcc1.L
Chr1L:172426321..172426345 21/25 Antisense off-target tmem132d.L
Chr3S:65800870..65800894 21/25 Sense off-target LOC108713037
Chr4L:99424500..99424524 21/25 Sense off-target LOC121403070
Chr4S:90341318..90341342 21/25 Sense off-target LOC108715697
Chr5S:40969121..40969145 21/25 Sense off-target LOC108717837
Chr5S:84321794..84321818 21/25 Sense off-target LOC108717438
Chr6S:121482895..121482919 21/25 Antisense off-target LOC108719755
Chr7L:130328716..130328740 21/25 Antisense off-target LOC108697061
Chr7L:70475020..70475044 21/25 Antisense off-target LOC108696379
Chr7L:70475620..70475644 21/25 Sense off-target LOC108696379
Chr8L:18333611..18333635 21/25 Antisense off-target LOC121396887
Chr8L:60969797..60969821 21/25 Antisense off-target LOC108698494
Chr8S:21031566..21031590 21/25 Antisense off-target LOC108700484
Chr8S:41141052..41141076 21/25 Sense off-target LOC108700024
Chr1L:208553254..208553278 21/25 Antisense off-target LOC108718341
Chr1L:171091600..171091624 21/25 Sense off-target LOC108716320
Chr2L:177681062..177681086 21/25 Sense off-target LOC108707579
Chr2S:146678871..146678895 21/25 Antisense off-target LOC108709955
Chr3L:153915105..153915129 21/25 Antisense off-target LOC108710653
Chr9_10L:65119659..65119683 21/25 Sense off-target LOC108701836
Chr3S:107905552..107905576 21/25 Antisense unknown
Chr3S:18695774..18695798 21/25 Antisense unknown
Chr3S:18695875..18695899 21/25 Sense unknown
Chr3S:26731212..26731236 21/25 Antisense unknown
Chr3S:87074767..87074791 21/25 Sense unknown
Chr3S:96147064..96147088 21/25 Antisense unknown
Chr4L:102444501..102444525 21/25 Sense unknown
Chr4L:92731179..92731203 21/25 Sense unknown
Chr4S:18170360..18170384 21/25 Antisense unknown
Chr4S:33138759..33138783 21/25 Sense unknown
Chr4S:33139525..33139549 21/25 Sense unknown
Chr4S:78911795..78911819 21/25 Antisense unknown
Chr4S:78912645..78912669 21/25 Sense unknown
Chr5L:113396519..113396543 21/25 Sense unknown
Chr5L:33384885..33384909 21/25 Antisense unknown
Chr5L:33385681..33385705 21/25 Sense unknown
Chr5L:3843138..3843162 21/25 Sense unknown
Chr5L:60918825..60918849 21/25 Sense unknown
Chr5L:60919590..60919614 21/25 Sense unknown
Chr5L:61210958..61210982 21/25 Antisense unknown
Chr5L:61211802..61211826 21/25 Sense unknown
Chr5L:67601750..67601774 21/25 Sense unknown
Chr5L:67602515..67602539 21/25 Sense unknown
Chr5L:73526863..73526887 21/25 Sense unknown
Chr5L:84219215..84219239 21/25 Sense unknown
Chr5S:124438249..124438273 21/25 Sense unknown
Chr5S:138657992..138658016 21/25 Antisense unknown
Chr5S:19553999..19554023 21/25 Sense unknown
Chr5S:37180075..37180099 21/25 Antisense unknown
Chr5S:37180254..37180278 21/25 Sense unknown
Chr5S:71596956..71596980 21/25 Antisense unknown
Chr5S:95065264..95065288 21/25 Antisense unknown
Chr5S:97052744..97052768 21/25 Sense unknown
Chr6L:104880308..104880332 21/25 Sense unknown
Chr6L:34015414..34015438 21/25 Sense unknown
Chr6S:115897629..115897653 21/25 Sense unknown
Chr6S:125204827..125204851 21/25 Antisense unknown
Chr6S:47666237..47666261 21/25 Antisense unknown
Chr6S:47667004..47667028 21/25 Antisense unknown
Chr6S:50104019..50104043 21/25 Sense unknown
Chr6S:77915985..77916009 21/25 Antisense unknown
Chr6S:79256721..79256745 21/25 Sense unknown
Chr6S:8373980..8374004 21/25 Sense unknown
Chr6S:88128317..88128341 21/25 Sense unknown
Chr7L:102570559..102570583 21/25 Antisense unknown
Chr7L:102570658..102570682 21/25 Sense unknown
Chr7L:128354417..128354441 21/25 Antisense unknown
Chr7L:128355091..128355115 21/25 Sense unknown
Chr7L:34869505..34869529 21/25 Antisense unknown
Chr7L:52217024..52217048 21/25 Antisense unknown
Chr7L:52231151..52231175 21/25 Antisense unknown
Chr7L:52232089..52232113 21/25 Sense unknown
Chr7L:56818517..56818541 21/25 Sense unknown
Chr7L:80014294..80014318 21/25 Antisense unknown
Chr7S:30575734..30575758 21/25 Antisense unknown
Chr7S:30576530..30576554 21/25 Sense unknown
Chr7S:82258564..82258588 21/25 Antisense unknown
Chr8L:109506269..109506293 21/25 Antisense unknown
Chr8L:120966988..120967012 21/25 Antisense unknown
Chr8L:120967765..120967789 21/25 Sense unknown
Chr8L:133188448..133188472 21/25 Antisense unknown
Chr8L:28061781..28061805 21/25 Sense unknown
Chr8L:95075406..95075430 21/25 Sense unknown
Chr8S:18947367..18947391 21/25 Antisense unknown
Chr8S:31140364..31140388 21/25 Antisense unknown
Chr8S:42651809..42651833 21/25 Sense unknown
Chr1L:2585300..2585324 21/25 Antisense unknown
Chr1L:2586067..2586091 21/25 Sense unknown
Chr1L:53953582..53953606 21/25 Antisense unknown
Chr1L:53954376..53954400 21/25 Sense unknown
Chr1L:54143424..54143448 21/25 Sense unknown
Chr1S:107322368..107322392 21/25 Sense unknown
Chr1L:133230497..133230521 21/25 Antisense unknown
Chr1L:143729686..143729710 21/25 Antisense unknown
Chr1L:143730218..143730242 21/25 Sense unknown
Chr1L:163681798..163681822 21/25 Sense unknown
Chr1L:178051925..178051949 21/25 Sense unknown
Chr1S:109859446..109859470 21/25 Sense unknown
Chr1S:137639621..137639645 21/25 Sense unknown
Chr1S:174791765..174791789 21/25 Antisense unknown
Chr1S:175112181..175112205 21/25 Sense unknown
Chr1S:190350070..190350094 21/25 Sense unknown
Chr1S:21075403..21075427 21/25 Sense unknown
Chr1S:24152175..24152199 21/25 Sense unknown
Chr1S:56833669..56833693 21/25 Antisense unknown
Chr2L:109276885..109276909 21/25 Antisense unknown
Chr2L:16057792..16057816 21/25 Sense unknown
Chr2L:179484703..179484727 21/25 Sense unknown
Chr2L:36787052..36787076 21/25 Antisense unknown
Chr2L:36787432..36787456 21/25 Sense unknown
Chr2L:88394987..88395011 21/25 Antisense unknown
Chr2L:88395589..88395613 21/25 Sense unknown
Chr2S:149227092..149227116 21/25 Sense unknown
Chr2S:164687983..164688007 21/25 Sense unknown
Chr2S:23315238..23315262 21/25 Antisense unknown
Chr2S:25767950..25767974 21/25 Sense unknown
Chr2S:66970768..66970792 21/25 Antisense unknown
Chr2S:77530160..77530184 21/25 Sense unknown
Chr3L:110313827..110313851 21/25 Sense unknown
Chr3L:160354616..160354640 21/25 Sense unknown
Chr3L:16770201..16770225 21/25 Antisense unknown
Chr3L:16770425..16770449 21/25 Sense unknown
Chr3L:42325996..42326020 21/25 Antisense unknown
Chr3L:42326357..42326381 21/25 Sense unknown
Chr3L:42327045..42327069 21/25 Sense unknown
Chr3L:59672832..59672856 21/25 Antisense unknown
Chr3L:75468282..75468306 21/25 Sense unknown
Chr8S:50584699..50584723 21/25 Antisense unknown
Chr8S:51477598..51477622 21/25 Antisense unknown
Chr8S:51588765..51588789 21/25 Antisense unknown
Chr8S:51589150..51589174 21/25 Sense unknown
Chr8S:55818912..55818936 21/25 Antisense unknown
Chr8S:74841202..74841226 21/25 Antisense unknown
Chr9_10L:108867610..108867634 21/25 Sense unknown
Chr9_10L:20839359..20839383 21/25 Sense unknown
Chr9_10L:26817510..26817534 21/25 Antisense unknown
Chr9_10L:37443810..37443834 21/25 Sense unknown
Chr9_10L:75127679..75127703 21/25 Antisense unknown
Chr9_10L:75128389..75128413 21/25 Sense unknown
Chr9_10S:34048106..34048130 21/25 Sense unknown
Chr9_10S:84862641..84862665 21/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? Shroom2 (APXL) regulates melanosome biogenesis and localization in the retinal pigment epithelium., Development 2006     
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???