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Summary Attributions Wiki
XB-MORPHOLINO-17250318
Morpholino Name: ska2 MO1
Synonyms: miR-130a MO
Target mRNA: ska2

Morpholino Type: uncategorized morpholino
Sequence: 5' AATGCCCTTTTAACATTGCACTGCT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 25/25 24/25
genome
MO
 
5' AGCAGTGCAATGTTAAAAGGGCATT 3'
   |||||||||||||||||||||||||
3' TCGTCACGTTACAATTTTCCCGTAA 5'
 
5' AGCAGTGCAATGTTAAAAGGGCATT 3'
   |||||||||||||||||||||||||
3' TCGTCACGTTACAATTTTCCCGTAA 5'
 
5' AGCAGTGCAATGTTAAAAAGGCATT 3'
   |||||||||||||||||| ||||||
3' TCGTCACGTTACAATTTTCCCGTAA 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr2L:99136530..99136554 25/25 Antisense target ska2.L
Chr2S:87033165..87033189 24/25 Antisense target ska2.S
Chr1S:142676948..142676972 24/25 Sense off-target LOC108707128
Chr1S:142668918..142668942 22/25 Sense off-target LOC108707128
Chr6L:102564535..102564559 21/25 Antisense off-target pard6g.L
Chr2L:141654178..141654202 21/25 Antisense off-target acvr1b.L
Chr3S:106323440..106323464 21/25 Sense off-target ablim3.S
Chr2L:91054291..91054315 21/25 Antisense off-target col16a1.L
Chr1L:167013538..167013562 24/25 Sense unknown
Chr1L:167004294..167004318 22/25 Sense unknown
Chr9_10S:90477255..90477279 22/25 Sense unknown
Chr7S:36248143..36248167 22/25 Antisense unknown
Chr6L:132941241..132941265 21/25 Sense unknown
Chr7S:14846276..14846300 21/25 Antisense unknown
Chr8L:19025258..19025282 21/25 Antisense unknown
Chr1L:50366749..50366773 21/25 Antisense unknown
Chr5L:134398874..134398898 21/25 Sense unknown
Chr5S:30836842..30836866 21/25 Sense unknown
tropicalis 10.0 Chr2:95225236..95225260 25/25 Antisense target ska2
Chr2:95225236..95225260 25/25 Antisense off-target mir130a
Chr1:153874766..153874790 24/25 Sense off-target ydjc
Chr1:153874766..153874790 24/25 Sense off-target mir130c
Chr1:153865918..153865942 22/25 Sense off-target ydjc
Chr4:132319601..132319625 22/25 Sense off-target nr2c2
Chr1:153865918..153865942 22/25 Sense off-target mir130b
Chr6:79036498..79036522 21/25 Sense off-target fbxl7
Chr2:174572128..174572152 21/25 Antisense off-target LOC100495609
Chr2:174572128..174572152 21/25 Antisense off-target LOC116406442
Chr2:15926147..15926171 21/25 Antisense unknown
Chr6:38863694..38863718 21/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development., Dev Biol 2010     
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