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Summary Attributions Wiki
XB-MORPHOLINO-17311309
Morpholino Name: cbx1 MO1
Synonyms: HP1beta-MO, TEgg130i17, XtHP1b
Target mRNA: cbx1

Morpholino Type: uncategorized morpholino
Sequence: 5' TTTCTTGTTCTGCTTCTTTCCCATG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 25/25 25/25
genome
MO
 
5' CATGGGAAAGAAGCAGAACAAGAAA 3'
   |||||||||||||||||||||||||
3' GTACCCTTTCTTCGTCTTGTTCTTT 5'
 
5' CATGGGAAAGAAGCAGAACAAGAAA 3'
   |||||||||||||||||||||||||
3' GTACCCTTTCTTCGTCTTGTTCTTT 5'
 
5' CATGGGAAAGAAGCAGAACAAGAAA 3'
   |||||||||||||||||||||||||
3' GTACCCTTTCTTCGTCTTGTTCTTT 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr9_10L:3289441..3289465 25/25 Sense target cbx1.L
Chr9_10S:2962380..2962404 25/25 Sense target cbx1.S
Chr7L:139084201..139084225 21/25 Antisense off-target phc2.L
Chr3L:22063931..22063955 21/25 Antisense off-target LOC108710191
Chr3L:96338666..96338690 21/25 Antisense off-target LOC108711279
Chr6S:12346468..12346492 21/25 Antisense off-target LOC108719828
Chr9_10L:46808090..46808114 22/25 Antisense unknown
Chr9_10L:32163217..32163241 21/25 Antisense unknown
Chr7L:90098878..90098902 21/25 Antisense unknown
Chr2L:186920169..186920193 21/25 Antisense unknown
Chr5S:52700480..52700504 21/25 Antisense unknown
Chr6L:86267097..86267121 21/25 Sense unknown
Chr1S:174146123..174146147 21/25 Sense unknown
Chr8L:56778552..56778576 21/25 Antisense unknown
Chr9_10L:22754462..22754486 21/25 Antisense unknown
tropicalis 10.0 Chr10:11722533..11722557 25/25 Sense target cbx1
Chr6:116864907..116864931 21/25 Sense off-target ca8
Chr5:64839690..64839714 21/25 Antisense off-target aig1
Chr2:126989181..126989205 21/25 Sense off-target klf12
Chr2:89363726..89363750 21/25 Sense off-target luzp1
Chr7:1527557..1527581 21/25 Antisense off-target sorcs1
Chr2:126989181..126989205 21/25 Sense off-target LOC105946545
Chr8:134205151..134205175 21/25 Sense off-target LOC100495225
Chr1:46506299..46506323 21/25 Antisense unknown
Chr6:87051648..87051672 21/25 Antisense unknown
Chr7:32118265..32118289 21/25 Sense unknown
Chr8:122526138..122526162 21/25 Sense unknown
Chr8:134280003..134280027 21/25 Sense unknown
Chr8:134330159..134330183 21/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006     
???morpholino.displaySummary.papersRecent??? Heterochromatin protein 1 beta regulates neural and neural crest development by repressing pluripotency-associated gene pou5f3.2/oct25 in Xenopus., Dev Dyn 2021  
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