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XB-MORPHOLINO-17311315
Morpholino Name:
kdm2a MO2
Synonyms: F-box and leucine-rich repeat protein 11-like, TNeu054b08, XtJEMMA
Target mRNA: kdm2a
Morpholino Type: uncategorized morpholino
Sequence: 5' GAGTTGCTCCTCTTCCATTTCTTCC 3'
Source: Gene Tools LLC
Synonyms: F-box and leucine-rich repeat protein 11-like, TNeu054b08, XtJEMMA
Target mRNA: kdm2a
Morpholino Type: uncategorized morpholino
Sequence: 5' GAGTTGCTCCTCTTCCATTTCTTCC 3'
Source: Gene Tools LLC
Target mRNA | tropicalis | laevis.L | |||||
Identities | 25/25 | 24/25 | |||||
genome
MO
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5' GGAAGAAATGGAAGAGGAGCAACTC 3' ||||||||||||||||||||||||| 3' CCTTCTTTACCTTCTCCTCGTTGAG 5' |
5' GGAAGAAATGGAAGAGGAGCAACTG 3'
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3' CCTTCTTTACCTTCTCCTCGTTGAG 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Target mRNA | ||
laevis 10.1 | Chr7L:63242513..63242537 | 24/25 | Sense | target | kdm2a.L | ||
Chr7S:49655868..49655892 | 24/25 | Sense | off-target | LOC108697539 | |||
Chr4L:63056441..63056465 | 21/25 | Sense | off-target | faap24.L | |||
Chr2L:190887066..190887090 | 21/25 | Antisense | off-target | trim26.L | |||
Chr9_10L:89569803..89569827 | 21/25 | Sense | off-target | nbeal1.L | |||
Chr7L:3362035..3362059 | 21/25 | Sense | off-target | LOC108695699 | |||
Chr7S:2446561..2446585 | 21/25 | Sense | off-target | LOC108697311 | |||
Chr5S:76114660..76114684 | 21/25 | Sense | unknown | ||||
Chr7L:108909063..108909087 | 21/25 | Antisense | unknown | ||||
Chr7S:97436132..97436156 | 21/25 | Antisense | unknown | ||||
Chr9_10S:50050607..50050631 | 21/25 | Sense | unknown | ||||
Chr2L:65524830..65524854 | 21/25 | Sense | unknown | tropicalis 10.0 | Chr7:57838229..57838253 | 25/25 | Antisense | target | kdm2a |
Chr8:136468090..136468114 | 21/25 | Antisense | off-target | LOC101732054 | |||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |