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Summary Attributions Wiki
XB-MORPHOLINO-17311443
Morpholino Name: nodal1 MO7
Synonyms: nr1, TGas124h10, Xtnr1
Target mRNA: nodal1

Morpholino Type: uncategorized morpholino
Sequence: 5' CAGGACTGCTGTCAGAAATGCCATC 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 24/25 24/25
genome
MO
 
5' GATGGCATTTCTGACAGCAGTCCTG 3'
   |||||||||||||||||||||||||
3' CTACCGTAAAGACTGTCGTCAGGAC 5'
 
5' CATGGCATTTCTGACAGCAGTCCTG 3'
    ||||||||||||||||||||||||
3' CTACCGTAAAGACTGTCGTCAGGAC 5'
 
5' CATGGCATTTCTGACAGCAGTCCTG 3'
    ||||||||||||||||||||||||
3' CTACCGTAAAGACTGTCGTCAGGAC 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr3L:141534622..141534646 24/25 Antisense target nodal1.L
Chr3S:21251762..21251786 24/25 Sense target nodal1.S
Chr8S:57183794..57183818 22/25 Antisense off-target lamp2.S
Chr6L:34748813..34748837 22/25 Sense off-target nxph1.L
Chr6S:27565117..27565141 21/25 Sense off-target nxph1.S
Chr8L:28509010..28509034 21/25 Sense off-target LOC108698253
Chr8L:28581374..28581398 21/25 Sense off-target LOC121396931
Chr8L:28874258..28874282 21/25 Sense off-target LOC108705658
Chr8L:29002980..29003004 21/25 Sense off-target LOC121396951
Chr8L:29002980..29003004 21/25 Sense off-target LOC121396952
Chr8L:29124415..29124439 21/25 Sense off-target LOC121393141
Chr8L:28850022..28850046 21/25 Sense off-target LOC108705659
Chr7L:96819549..96819573 21/25 Antisense unknown
Chr2S:127545796..127545820 21/25 Sense unknown
Chr8L:28646878..28646902 21/25 Sense unknown
Chr8L:28717248..28717272 21/25 Sense unknown
tropicalis 10.0 Chr3:132122715..132122739 25/25 Antisense target nodal1
Chr6:34752588..34752612 22/25 Sense off-target nxph1
Chr8:40811680..40811704 21/25 Sense off-target ngrn
Chr8:40811680..40811704 21/25 Sense off-target hsf3
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006     
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