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XB-MORPHOLINO-17311444

Morpholino Name: nodal1 MO8
Synonyms: nr1, TGas124h10, Xtnr1.2
Target mRNA: nodal1

Morpholino Type: uncategorized morpholino
Sequence: 5' CTTGTGCTGCTGTTCTCTCTCTTGC 3'

Source: Gene Tools LLC


Target mRNA tropicalis
Identities 25/25
genome
MO
5' GCAAGAGAGAGAACAGCAGCACAAG 3'
   |||||||||||||||||||||||||
3' CGTTCTCTCTCTTGTCGTCGTGTTC 5'
     
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr1S:88993132..88993156 22/25 Sense off-target tcf3.S
Chr1S:143028186..143028210 21/25 Sense off-target ufd1.S
Chr1L:107253030..107253054 21/25 Sense off-target tcf3.L
Chr8S:66305769..66305793 21/25 Sense off-target mamld1.S
Chr1L:25750289..25750313 21/25 Antisense off-target sorcs2.L
Chr3S:61078876..61078900 21/25 Antisense off-target LOC108712992
Chr8S:102701072..102701096 21/25 Antisense off-target LOC108700432
Chr1S:176973824..176973848 22/25 Sense unknown
Chr7L:6436190..6436214 22/25 Sense unknown
Chr1L:126369128..126369152 21/25 Antisense unknown
tropicalis 10.0 Chr3:132122690..132122714 25/25 Antisense target nodal1
Chr7:10027542..10027566 21/25 Antisense off-target iffo1
Chr9:90503525..90503549 22/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006     
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