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Summary Attributions Wiki
XB-MORPHOLINO-17311477
Morpholino Name: smad9 MO2
Synonyms: Smad8, TTpA007k16, XtSmad8
Target mRNA: smad9

Morpholino Type: uncategorized morpholino
Sequence: 5' AGTGCTGGCGTGCATAGGATTAGCT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 23/25 24/25
genome
MO
 
5' AGCTAATCCTATGCACGCCAGCACT 3'
   |||||||||||||||||||||||||
3' TCGATTAGGATACGTGCGGTCGTGA 5'
 
5' AGCAAATCCAATGCACGCCAGCACT 3'
   ||| ||||| |||||||||||||||
3' TCGATTAGGATACGTGCGGTCGTGA 5'
 
5' AGCGAATCCTATGCACGCCAGCACT 3'
   ||| |||||||||||||||||||||
3' TCGATTAGGATACGTGCGGTCGTGA 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr2S:143681282..143681306 24/25 Antisense target smad9.S
Chr2L:160614573..160614597 23/25 Antisense target smad9.L
Chr4L:26695366..26695390 21/25 Sense off-target macrod1.L
Chr8L:15432508..15432532 21/25 Antisense off-target col27a1.L
Chr5L:158773366..158773390 21/25 Sense off-target slc25a27.L
Chr9_10L:33484755..33484779 21/25 Sense off-target LOC108701017
Chr6L:127511579..127511603 21/25 Sense off-target LOC108719284
Chr3L:145481831..145481855 21/25 Sense unknown
Chr3S:35309059..35309083 21/25 Sense unknown
Chr1S:8798306..8798330 21/25 Sense unknown
Chr8L:104647499..104647523 21/25 Sense unknown
Chr8S:61081434..61081458 21/25 Antisense unknown
tropicalis 10.0 Chr2:151740095..151740119 25/25 Antisense target smad9
Chr1:38914183..38914207 21/25 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006     
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