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XB-MORPHOLINO-17311479

Morpholino Name: st13 MO1
Synonyms: TEgg110h11, XtST13
Target mRNA: st13

Morpholino Type: uncategorized morpholino
Sequence: 5' GCGGGTCCATAATGAAGGAGAAATG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 22/25 21/25
genome
MO
5' CATTTCTCCTTCATTATGGACCCGC 3'
   |||||||||||||||||||||||||
3' GTAAAGAGGAAGTAATACCTGGGCG 5'
5' CGTGTCTCCTTCATTATGGACCCGA 3'
   | | |||||||||||||||||||| 
3' GTAAAGAGGAAGTAATACCTGGGCG 5'
5' CGTGTCTTCTTCATTATGGACCAGC 3'
   | | ||| |||||||||||||| ||
3' GTAAAGAGGAAGTAATACCTGGGCG 5'
   
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr4L:113044646..113044670 22/25 Sense target st13.L
Chr4S:94801081..94801105 21/25 Sense target st13.S
Chr6S:19188377..19188401 23/25 Antisense off-target kiaa1217.S
Chr3L:107697292..107697316 22/25 Sense off-target tmod3.L
Chr6S:97619216..97619240 22/25 Antisense off-target garem1.S
Chr1S:140322828..140322852 22/25 Sense off-target tmem233.S
Chr1L:175336344..175336368 21/25 Sense off-target hip1r.L
Chr2L:6536665..6536689 21/25 Sense off-target pou2f1.L
Chr5S:86853945..86853969 21/25 Sense off-target LOC108718034
Chr2L:184477462..184477486 21/25 Antisense unknown
tropicalis 10.0 Chr4:115887070..115887094 25/25 Sense target st13
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006     
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