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XB-MORPHOLINO-17329624
Morpholino Name:
pkdcc.1 MO2
Synonyms:
Target mRNA: pkdcc.1
Morpholino Type: uncategorized morpholino
Sequence: 5' CCTCTGCCCTTTACTGTAAATGAA 3'
Source: Gene Tools LLC
Synonyms:
Target mRNA: pkdcc.1
Morpholino Type: uncategorized morpholino
Sequence: 5' CCTCTGCCCTTTACTGTAAATGAA 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||||
| Identities | 24/24 | 24/24 | 23/24 | ||||
genome
MO
|
5' TTCATTTACAGTAAAGGGCAGAGG 3' |||||||||||||||||||||||| 3' AAGTAAATGTCATTTCCCGTCTCC 5' |
5' TTCATTTACAGTAAAGGGCAGAGG 3' |||||||||||||||||||||||| 3' AAGTAAATGTCATTTCCCGTCTCC 5' |
5' TTCATTTACAGTAAAGGACAGAGG 3'
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3' AAGTAAATGTCATTTCCCGTCTCC 5' |
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Genomic Alignments  |
Position | Identity | Strand | Target | Target mRNA | ||
| laevis 10.1 | Chr8L:87325101..87325124 | 24/24 | Antisense | target | pkdcc.1.L | ||
| Chr8S:12703347..12703370 | 23/24 | Sense | target | pkdcc.1.S | |||
| Chr3S:113581397..113581420 | 24/24 | Sense | off-target | rars1.S | |||
| Chr3S:124568487..124568510 | 23/24 | Antisense | off-target | LOC108703482 | |||
| Chr6L:127490063..127490086 | 23/24 | Sense | off-target | LOC108719284 | |||
| Chr2S:50117720..50117743 | 23/24 | Antisense | off-target | LOC108709423 | |||
| Chr1S:104519182..104519205 | 22/24 | Antisense | off-target | srp72.S | |||
| Chr1L:182568455..182568478 | 22/24 | Sense | off-target | marchf3.L | |||
| Chr8L:11520850..11520873 | 20/24 | Sense | off-target | g6pd.L | |||
| Chr3L:49071782..49071805 | 20/24 | Sense | off-target | stk10.L | |||
| Chr3S:41357521..41357544 | 20/24 | Sense | off-target | mctp2.S | |||
| Chr9_10S:13266033..13266056 | 20/24 | Antisense | off-target | gata5.S | |||
| Chr4S:64867068..64867091 | 20/24 | Sense | off-target | pde4b.S | |||
| Chr2S:581927..581950 | 20/24 | Antisense | off-target | il1rapl1.S | |||
| Chr3S:112804212..112804235 | 20/24 | Sense | off-target | LOC108712409 | |||
| Chr1L:95921093..95921116 | 23/24 | Sense | unknown | ||||
| Chr1S:36869148..36869171 | 21/24 | Antisense | unknown | ||||
| Chr4L:19219080..19219103 | 21/24 | Antisense | unknown | ||||
| Chr5S:74629301..74629324 | 21/24 | Antisense | unknown | ||||
| Chr6L:48722260..48722283 | 21/24 | Antisense | unknown | ||||
| Chr2L:103790344..103790367 | 20/24 | Antisense | unknown | ||||
| Chr7L:46837001..46837024 | 20/24 | Sense | unknown | ||||
| Chr5L:148058590..148058613 | 20/24 | Sense | unknown | ||||
| Chr5S:81315071..81315094 | 20/24 | Sense | unknown | ||||
| Chr1L:73503195..73503218 | 20/24 | Antisense | unknown | tropicalis 10.0 | Chr8:96301356..96301379 | 24/24 | Antisense | target | pkdcc.1 |
| Chr1:32538661..32538684 | 20/24 | Antisense | unknown | ||||
| Chr1:33623503..33623526 | 20/24 | Antisense | unknown | ||||
| Chr4:68473915..68473938 | 20/24 | Antisense | unknown | ||||
| Chr6:102735053..102735076 | 20/24 | Sense | unknown | ||||
| Chr6:30739052..30739075 | 20/24 | Antisense | unknown | ||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Dev Biol 2017  |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
