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XB-MORPHOLINO-23622432
Morpholino Name: lrp2 MO1
Synonyms:
Target mRNA: lrp2

Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' AGCTCCCATCTCTGTCTCCTGC 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L
Identities 21/22 22/22
genome
MO
 
5' GCAGGAGACAGAGATGGGAACT 3'
   ||||||||||||||||||| ||
3' CGTCCTCTGTCTCTACCCTCGA 5'
 
5' GCAGGAGACAGAGATGGGAGCT 3'
   ||||||||||||||||||||||
3' CGTCCTCTGTCTCTACCCTCGA 5'
     
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr9_10L:75100766..75100787 22/22 Sense target lrp2.L
Chr2S:129252146..129252167 20/22 Sense off-target LOC121400678
Chr5S:86743509..86743530 19/22 Antisense off-target abcf3.S
Chr7S:37657241..37657262 19/22 Sense off-target grid1.S
Chr8S:97319007..97319028 19/22 Antisense off-target ntrk1.S
Chr6L:8992737..8992758 19/22 Sense off-target ccdc13.L
Chr6L:8992866..8992887 19/22 Sense off-target ccdc13.L
Chr6L:8993212..8993233 19/22 Sense off-target ccdc13.L
Chr6L:8993386..8993407 19/22 Sense off-target ccdc13.L
Chr7L:137060863..137060884 19/22 Sense off-target igsf21.L
Chr3L:41694279..41694300 19/22 Sense off-target LOC108710917
Chr4S:95500128..95500149 19/22 Sense off-target LOC108715732
Chr6L:74992134..74992155 19/22 Sense off-target LOC108718510
Chr1S:182467447..182467468 18/22 Sense off-target parp8.S
Chr1S:182537149..182537170 18/22 Antisense off-target parp8.S
Chr4L:121281893..121281914 18/22 Sense off-target cyth4.L
Chr6L:50782366..50782387 18/22 Sense off-target rbms3.L
Chr9_10S:78666571..78666592 18/22 Sense off-target bmpr2.S
Chr1S:124342811..124342832 18/22 Antisense off-target ntrk2.S
Chr1S:173267357..173267378 18/22 Sense off-target crhbp.S
Chr3L:20063692..20063713 18/22 Antisense off-target tspan9.L
Chr7S:111272383..111272404 18/22 Sense off-target igsf21.S
Chr8L:45484206..45484227 18/22 Sense off-target diaph2.L
Chr1L:103314026..103314047 18/22 Antisense off-target antxr2.L
Chr1L:180205305..180205326 18/22 Sense off-target kremen1.L
Chr2L:137848919..137848940 18/22 Sense off-target LOC121399657
Chr2S:155187694..155187715 18/22 Antisense off-target LOC108710006
Chr2S:52065437..52065458 18/22 Sense off-target LOC108708905
Chr3L:128903052..128903073 18/22 Antisense off-target LOC108711533
Chr3L:18361855..18361876 18/22 Sense off-target LOC108710765
Chr3L:80281312..80281333 18/22 Sense off-target LOC108711168
Chr3S:52912925..52912946 18/22 Antisense off-target LOC121402033
Chr4L:54652471..54652492 18/22 Sense off-target LOC121403018
Chr5S:113838202..113838223 18/22 Antisense off-target LOC121394084
Chr5S:84229418..84229439 18/22 Sense off-target LOC108717438
Chr5S:97191543..97191564 18/22 Sense off-target LOC108717452
Chr6L:59020316..59020337 18/22 Antisense off-target LOC108718976
Chr6L:74824464..74824485 18/22 Antisense off-target LOC108718510
Chr7L:50868912..50868933 18/22 Antisense off-target LOC108695799
Chr1L:79820531..79820552 18/22 Antisense off-target LOC108710879
Chr5S:64492860..64492881 19/22 Sense unknown
Chr8L:48194873..48194894 19/22 Antisense unknown
Chr8L:8598973..8598994 19/22 Antisense unknown
Chr8S:34139896..34139917 19/22 Sense unknown
Chr8S:68715862..68715883 19/22 Sense unknown
Chr1L:196757432..196757453 19/22 Antisense unknown
Chr1S:26949638..26949659 18/22 Sense unknown
Chr1S:35514940..35514961 18/22 Sense unknown
Chr1S:40975378..40975399 18/22 Sense unknown
Chr1S:64030267..64030288 18/22 Antisense unknown
Chr1S:69784353..69784374 18/22 Sense unknown
Chr1S:70161189..70161210 18/22 Antisense unknown
Chr1S:70228621..70228642 18/22 Sense unknown
Chr1S:8328846..8328867 18/22 Sense unknown
Chr2L:106895553..106895574 18/22 Sense unknown
Chr2L:160423813..160423834 18/22 Antisense unknown
Chr2L:40440210..40440231 18/22 Antisense unknown
Chr2L:77882060..77882081 18/22 Antisense unknown
Chr2S:15674847..15674868 18/22 Sense unknown
Chr2S:44326169..44326190 18/22 Antisense unknown
Chr2S:87544710..87544731 18/22 Sense unknown
Chr2S:91033024..91033045 18/22 Sense unknown
Chr3L:119653791..119653812 18/22 Sense unknown
Chr3L:130863254..130863275 18/22 Antisense unknown
Chr3L:130925512..130925533 18/22 Antisense unknown
Chr3L:34915730..34915751 18/22 Sense unknown
Chr3L:35724694..35724715 18/22 Sense unknown
Chr3L:89132159..89132180 18/22 Sense unknown
Chr3S:102661743..102661764 18/22 Sense unknown
Chr3S:114611014..114611035 18/22 Sense unknown
Chr3S:120134673..120134694 18/22 Sense unknown
Chr3S:34317714..34317735 18/22 Antisense unknown
Chr3S:38124715..38124736 18/22 Antisense unknown
Chr3S:40883371..40883392 18/22 Sense unknown
Chr3S:41066566..41066587 18/22 Sense unknown
Chr3S:81255499..81255520 18/22 Antisense unknown
Chr3S:87613807..87613828 18/22 Antisense unknown
Chr3S:94397688..94397709 18/22 Antisense unknown
Chr4L:110060393..110060414 18/22 Antisense unknown
Chr4L:123411844..123411865 18/22 Antisense unknown
Chr4L:47290688..47290709 18/22 Antisense unknown
Chr4L:49873891..49873912 18/22 Antisense unknown
Chr4L:54511547..54511568 18/22 Sense unknown
Chr4L:82806115..82806136 18/22 Antisense unknown
Chr4S:34539031..34539052 18/22 Antisense unknown
Chr4S:36926396..36926417 18/22 Sense unknown
Chr4S:38633731..38633752 18/22 Sense unknown
Chr4S:53681425..53681446 18/22 Sense unknown
Chr4S:95944974..95944995 18/22 Sense unknown
Chr4S:96157957..96157978 18/22 Antisense unknown
Chr5L:103796563..103796584 18/22 Antisense unknown
Chr5L:55282666..55282687 18/22 Antisense unknown
Chr5L:62848064..62848085 18/22 Sense unknown
Chr5L:62855749..62855770 18/22 Sense unknown
Chr5S:15547318..15547339 18/22 Antisense unknown
Chr5S:20011631..20011652 18/22 Antisense unknown
Chr5S:70557265..70557286 18/22 Sense unknown
Chr5S:71500439..71500460 18/22 Antisense unknown
Chr5S:72377083..72377104 18/22 Antisense unknown
Chr5S:88796456..88796477 18/22 Antisense unknown
Chr5S:91756551..91756572 18/22 Antisense unknown
Chr6L:122990592..122990613 18/22 Sense unknown
Chr6L:158855040..158855061 18/22 Sense unknown
Chr6L:31069089..31069110 18/22 Antisense unknown
Chr6L:89517721..89517742 18/22 Sense unknown
Chr6L:91637625..91637646 18/22 Antisense unknown
Chr6S:108700890..108700911 18/22 Sense unknown
Chr6S:14615352..14615373 18/22 Antisense unknown
Chr6S:28022074..28022095 18/22 Antisense unknown
Chr6S:57663061..57663082 18/22 Sense unknown
Chr6S:65628351..65628372 18/22 Antisense unknown
Chr7L:102560906..102560927 18/22 Sense unknown
Chr7L:12392665..12392686 18/22 Antisense unknown
Chr7L:17239155..17239176 18/22 Antisense unknown
Chr7L:46471436..46471457 18/22 Antisense unknown
Chr7L:81448109..81448130 18/22 Antisense unknown
Chr7L:85294263..85294284 18/22 Antisense unknown
Chr7S:37066104..37066125 18/22 Sense unknown
Chr7L:75569119..75569140 18/22 Antisense unknown
Chr7S:42570346..42570367 18/22 Sense unknown
Chr7S:90033911..90033932 18/22 Antisense unknown
Chr8L:119634523..119634544 18/22 Antisense unknown
Chr8L:47495551..47495572 18/22 Antisense unknown
Chr8L:53949998..53950019 18/22 Sense unknown
Chr8S:18217303..18217324 18/22 Sense unknown
Chr8S:18641429..18641450 18/22 Antisense unknown
Chr8S:19583778..19583799 18/22 Sense unknown
Chr8S:23987702..23987723 18/22 Antisense unknown
Chr8S:33347779..33347800 18/22 Sense unknown
Chr8S:64658849..64658870 18/22 Sense unknown
Chr8S:73944218..73944239 18/22 Sense unknown
Chr9_10L:21150398..21150419 18/22 Sense unknown
Chr9_10L:30986241..30986262 18/22 Antisense unknown
Chr9_10L:71777148..71777169 18/22 Sense unknown
Chr9_10L:88871371..88871392 18/22 Sense unknown
Chr1L:102856207..102856228 18/22 Antisense unknown
Chr9_10S:27138486..27138507 18/22 Antisense unknown
Chr9_10S:58477292..58477313 18/22 Sense unknown
Chr9_10S:61093303..61093324 18/22 Antisense unknown
Chr9_10S:102499186..102499207 18/22 Sense unknown
Chr1L:148417578..148417599 18/22 Sense unknown
Chr1L:44802627..44802648 18/22 Antisense unknown
Chr1L:73845987..73846008 18/22 Sense unknown
Chr1S:100867969..100867990 18/22 Sense unknown
Chr1S:140042783..140042804 18/22 Sense unknown
Chr1S:147591233..147591254 18/22 Sense unknown
Chr1S:147927938..147927959 18/22 Sense unknown
Chr1S:159960260..159960281 18/22 Antisense unknown
Chr1S:166788775..166788796 18/22 Antisense unknown
tropicalis 10.0 Chr9:68728084..68728105 21/22 Antisense target lrp2
Chr7:35597596..35597617 20/22 Sense off-target cpn1
Chr1:144722731..144722752 19/22 Sense off-target cabp7
Chr5:150823842..150823863 19/22 Sense off-target fam167a
Chr7:59302592..59302613 19/22 Sense off-target LOC100486241
Chr3:51185493..51185514 18/22 Sense off-target LOC100490346
Chr4:1940022..1940043 18/22 Sense off-target LOC100498645
Chr1:20726355..20726376 19/22 Sense unknown
Chr6:92008146..92008167 19/22 Sense unknown
Chr8:35369951..35369972 19/22 Sense unknown
Chr10:25365477..25365498 18/22 Sense unknown
Chr2:102305303..102305324 18/22 Antisense unknown
Chr4:101973658..101973679 18/22 Sense unknown
Chr4:2058702..2058723 18/22 Sense unknown
Chr4:81839844..81839865 18/22 Sense unknown
Chr5:72877357..72877378 18/22 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? Neural tube closure requires the endocytic receptor Lrp2 and its functional interaction with intracellular scaffolds., Development 2021     
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???