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XB-GRNA-23659195
gRNA Name:
pou5f3.3 gRNA1
Synonyms:
Genomic Target: pou5f3.3
PAM Sequence: GGG
Sequence: 5' GGGGGCAATTACCAGTATTTGGG 3'
Synonyms:
Genomic Target: pou5f3.3
PAM Sequence: GGG
Sequence: 5' GGGGGCAATTACCAGTATTTGGG 3'
Genomic Target | laevis.L | ||||||
Identities | 23/23 | ||||||
genome
gRNA
|
5' CCCAAATACTGGTAATTGCCCCC 3' ||||||||||||||||||||||| 3' GGGTTTATGACCATTAACGGGGG 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Genomic Target | ||
laevis 9.2 | chr8L:2135237..2135259 | 23/23 | Antisense | target | pou5f3.3.L | ||
chr8S:85123517..85123539 | 21/23 | Antisense | off-target | ebp.S | |||
chr7L:5098023..5098045 | 19/23 | Sense | off-target | rgs10.L | |||
chr4S:15262561..15262583 | 19/23 | Antisense | off-target | trim44.S | |||
chr7L:6609532..6609554 | 19/23 | Antisense | off-target | papss2.L | |||
chr8S:98879507..98879529 | 19/23 | Sense | off-target | nectin4.S | |||
chr6S:14007948..14007970 | 19/23 | Antisense | off-target | LOC108720059 | |||
chr6L:116002875..116002897 | 19/23 | Antisense | off-target | loc105947521.L | |||
chr1S:149651851..149651873 | 19/23 | Sense | off-target | LOC108707234 [provisional:mctp1] | |||
chr2L:12863763..12863785 | 19/23 | Sense | unknown | ||||
chr4S:25002811..25002833 | 19/23 | Antisense | unknown | tropicalis 10.0 | Chr1:207511949..207511971 | 19/23 | Sense | off-target | setbp1 |
Chr10:13996269..13996291 | 19/23 | Sense | off-target | znf652 | |||
Chr10:44856353..44856375 | 19/23 | Sense | off-target | unc13d | |||
Chr3:121933868..121933890 | 19/23 | Antisense | off-target | snrnp27 | |||
Chr5:163048264..163048286 | 19/23 | Antisense | off-target | qrich1l2 | |||
Chr4:100122395..100122417 | 19/23 | Sense | unknown | ||||
Chr4:664300..664322 | 19/23 | Antisense | unknown | ||||
Chr9:68538216..68538238 | 19/23 | Antisense | unknown | ||||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
Pou5f3.3 is involved in establishment and maintenance of hematopoietic cells during Xenopus development., Tissue Cell 2021 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |