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XB-GRNA-23659546
gRNA Name:
cdhr1 gRNA1
Synonyms: cdhr1 L/S exon 7
Genomic Target: cdhr1
Sequence: 5' GGAGTTTTGAGGATAAAAGCGGG 3'
Synonyms: cdhr1 L/S exon 7
Genomic Target: cdhr1
Sequence: 5' GGAGTTTTGAGGATAAAAGCGGG 3'
Genomic Target | tropicalis | laevis.L | laevis.S | ||||
Identities | 21/23 | 23/23 | 22/23 | ||||
genome
gRNA
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5' CCCGCTTTTAATCTCAAAACTCC 3'
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3' GGGCGAAAATAGGAGTTTTGAGG 5' |
5' CCCGCTTTTATCCTCAAAACTCC 3' ||||||||||||||||||||||| 3' GGGCGAAAATAGGAGTTTTGAGG 5' |
5' CCAGCTTTTATCCTCAAAACTCC 3'
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3' GGGCGAAAATAGGAGTTTTGAGG 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Genomic Target | ||
laevis 10.1 | Chr7L:52439132..52439154 | 23/23 | Sense | target | cdhr1.L | ||
Chr7S:42937545..42937567 | 22/23 | Sense | target | cdhr1.S | |||
Chr3L:93215389..93215411 | 19/23 | Sense | off-target | kcp.L | |||
Chr4S:29479106..29479128 | 19/23 | Sense | off-target | nkd1.S | |||
Chr2S:25138027..25138049 | 19/23 | Antisense | off-target | rcsd1.S | |||
Chr3L:37271730..37271752 | 20/23 | Sense | unknown | tropicalis 10.0 | Chr7:52473120..52473142 | 21/23 | Sense | target | cdhr1 |
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
Distinct roles for prominin-1 and photoreceptor cadherin in outer segment disc morphogenesis in CRISPR-altered X. laevis., J Cell Sci 2021 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |