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Summary Attributions Wiki
XB-MORPHOLINO-23659614
Morpholino Name: sobp MO1
Synonyms:
Target mRNA: sobp

Morpholino Type: translation blocking morpholino
Sequence: 5' TCCCCTCTTTTTCCATTTCTGCCAT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 25/25 25/25
genome
MO
 
5' ATGGCAGAAATGGAAAAAGAGGGGA 3'
   |||||||||||||||||||||||||
3' TACCGTCTTTACCTTTTTCTCCCCT 5'
 
5' ATGGCAGAAATGGAAAAAGAGGGGA 3'
   |||||||||||||||||||||||||
3' TACCGTCTTTACCTTTTTCTCCCCT 5'
 
5' ATGGCAGAAATGGAAAAAGAGGGGA 3'
   |||||||||||||||||||||||||
3' TACCGTCTTTACCTTTTTCTCCCCT 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr5L:82368941..82368965 25/25 Sense target sobp.L
Chr5S:65479369..65479393 25/25 Sense target sobp.S
Chr7L:66672368..66672392 23/25 Sense off-target pex14.L
Chr2S:121092673..121092697 22/25 Antisense off-target tdrd3.S
Chr8L:83618397..83618421 22/25 Sense off-target fancm.L
Chr9_10L:72087111..72087135 22/25 Sense off-target psmd14.L
Chr1S:181155040..181155064 21/25 Antisense off-target fst.S
Chr2S:79391490..79391514 21/25 Sense off-target nfyc.S
Chr5S:41261253..41261277 21/25 Sense off-target strn.S
Chr7L:17086070..17086094 21/25 Antisense off-target ebf3.L
Chr7S:13127279..13127303 21/25 Antisense off-target ebf3.S
Chr9_10L:111170606..111170630 21/25 Antisense off-target pms2.L
Chr1S:153541177..153541201 21/25 Sense off-target taok3.S
Chr1S:72556641..72556665 21/25 Antisense off-target rbpms.S
Chr2L:143780874..143780898 21/25 Antisense off-target itga7.L
Chr2S:117256368..117256392 21/25 Antisense off-target fbxl3.S
Chr3L:105376202..105376226 21/25 Sense off-target tcf12.L
Chr4S:56667048..56667072 21/25 Sense off-target fhod1.S
Chr1L:125595382..125595406 21/25 Sense off-target lpar1.L
Chr1L:164443340..164443364 21/25 Antisense off-target srsf9.L
Chr6L:105034494..105034518 21/25 Antisense off-target znf516.L
Chr7L:37136369..37136393 21/25 Sense off-target tm9sf3.L
Chr7L:72552210..72552234 21/25 Sense off-target zbtb44.L
Chr8L:96697241..96697265 21/25 Sense off-target sptbn5.L
Chr2L:60965040..60965064 21/25 Sense off-target MGC130623
Chr4S:15266639..15266663 21/25 Sense off-target arfgap2.S
Chr5L:27322243..27322267 21/25 Antisense off-target macrod2.S
Chr9_10S:49010144..49010168 21/25 Sense off-target slc49a4.S
Chr8S:55428639..55428663 21/25 Antisense off-target slc16a2.S
Chr1L:90969113..90969137 21/25 Antisense off-target rasgef1b.L
Chr5S:103268924..103268948 21/25 Sense off-target slc66a1l.S
Chr9_10L:44025973..44025997 21/25 Antisense off-target slc25a19.L
Chr2L:181314208..181314232 21/25 Sense off-target LOC108705781
Chr2S:75012069..75012093 21/25 Sense off-target LOC108709567
Chr3L:144571902..144571926 21/25 Antisense off-target LOC121401281
Chr3L:144572495..144572519 21/25 Sense off-target LOC121401281
Chr3L:144583538..144583562 21/25 Sense off-target LOC121401281
Chr3L:144587876..144587900 21/25 Sense off-target LOC121401281
Chr3L:55306917..55306941 21/25 Antisense off-target LOC108710998
Chr3S:69439641..69439665 21/25 Sense off-target LOC108712345
Chr2S:97548142..97548166 21/25 Sense off-target LOC108709681
Chr5S:84502349..84502373 21/25 Antisense off-target LOC108717438
Chr7L:9146391..9146415 21/25 Antisense off-target LOC108695740
Chr1L:168846128..168846152 21/25 Sense off-target LOC121394978
Chr6L:123885857..123885881 22/25 Antisense unknown
Chr2L:170761253..170761277 21/25 Antisense unknown
Chr2L:41875026..41875050 21/25 Antisense unknown
Chr2S:156380581..156380605 21/25 Sense unknown
Chr2S:17370914..17370938 21/25 Antisense unknown
Chr1L:102934328..102934352 21/25 Antisense unknown
Chr3L:133007709..133007733 21/25 Antisense unknown
Chr3L:1379396..1379420 21/25 Sense unknown
Chr4L:2957576..2957600 21/25 Sense unknown
Chr4L:74422327..74422351 21/25 Antisense unknown
Chr5S:123879531..123879555 21/25 Sense unknown
Chr6L:101090271..101090295 21/25 Sense unknown
Chr6L:54224723..54224747 21/25 Antisense unknown
Chr6S:85617760..85617784 21/25 Sense unknown
Chr6S:91879984..91880008 21/25 Sense unknown
Chr6S:99348154..99348178 21/25 Sense unknown
Chr7L:95946427..95946451 21/25 Sense unknown
Chr8L:78797412..78797436 21/25 Sense unknown
Chr8L:83282919..83282943 21/25 Sense unknown
Chr5S:75704757..75704781 21/25 Sense unknown
Chr9_10L:92423829..92423853 21/25 Sense unknown
Chr9_10S:12154294..12154318 21/25 Antisense unknown
Chr1L:100153618..100153642 21/25 Antisense unknown
Chr1L:215583702..215583726 21/25 Antisense unknown
tropicalis 10.0 Chr5:78846538..78846562 25/25 Sense target sobp
Chr7:22375986..22376010 22/25 Antisense off-target ebf3
Chr3:15448760..15448784 21/25 Antisense off-target mrpl38
Chr3:141968572..141968596 21/25 Antisense unknown
Chr10:32551244..32551268 21/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? Sobp modulates the transcriptional activation of Six1 target genes and is required during craniofacial development., Development 2021     
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