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Summary Attributions Wiki
XB-MORPHOLINO-29208941
Morpholino Name: sox2 MO6
Synonyms:
Target mRNA: sox2

Morpholino Type: translation blocking morpholino
Sequence: 5' CGGTCTCCATCATGCTGTACAT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L
Identities 21/22 22/22
genome
MO
 
5' ATGTACAACATGATGGAGACCG 3'
   ||||||| ||||||||||||||
3' TACATGTCGTACTACCTCTGGC 5'
 
5' ATGTACAGCATGATGGAGACCG 3'
   ||||||||||||||||||||||
3' TACATGTCGTACTACCTCTGGC 5'
     
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr5L:114960539..114960560 22/22 Sense target sox2.L
Chr5S:94686925..94686946 22/22 Sense off-target LOC108718087
Chr4L:129890025..129890046 20/22 Antisense off-target grm7.L
Chr9_10L:53490994..53491015 20/22 Antisense off-target LOC108701201
Chr4S:109647158..109647179 19/22 Antisense off-target grm7.S
Chr1S:25811003..25811024 19/22 Sense off-target apbb2.S
Chr1L:198328304..198328325 19/22 Antisense off-target zfyve16.L
Chr2S:10344743..10344764 18/22 Antisense off-target robo2.S
Chr2L:9330456..9330477 18/22 Antisense off-target prdm15.L
Chr3L:6224338..6224359 18/22 Antisense off-target LOC108704366
Chr7L:101433924..101433945 18/22 Antisense off-target LOC108697019
Chr3L:49533265..49533286 19/22 Sense unknown
Chr5L:22589590..22589611 19/22 Sense unknown
Chr6S:56830636..56830657 19/22 Antisense unknown
Chr1L:229449440..229449461 19/22 Antisense unknown
Chr1S:199324281..199324302 19/22 Sense unknown
Chr3L:155219342..155219363 18/22 Sense unknown
Chr4S:131483164..131483185 18/22 Sense unknown
Chr7S:102998048..102998069 18/22 Sense unknown
Chr7S:84663303..84663324 18/22 Antisense unknown
Chr2L:64406428..64406449 18/22 Antisense unknown
tropicalis 10.0 Chr5:108037425..108037446 21/22 Sense target sox2
Chr1:211666836..211666857 20/22 Sense off-target phf24
Chr5:73634384..73634405 19/22 Antisense off-target asf1a
Chr1:70885000..70885021 18/22 Antisense off-target pde5a
Chr5:27199549..27199570 19/22 Sense unknown
Chr5:88978014..88978035 19/22 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? β-Catenin and SOX2 Interaction Regulate Visual Experience-Dependent Cell Homeostasis in the Developing Xenopus Thalamus., Int J Mol Sci 2023     
???morpholino.displaySummary.papersRecent??? SoxB1 transcription factors are essential for initiating and maintaining neural plate border gene expression., Development 2024     
???morpholino.displaySummary.papersAll???