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XB-GENEPAGE-485395
???displayGene.symbol???: cdx1
???displayGene.name???: caudal type homeobox 1
???displayGene.synonyms???
cdx-1
(
???displayGene.geneFunction??? homeodomain transcription factor Protein Function :
Plays a role in transcriptional regulation. Involved in activated KRAS-mediated transcriptional activation of PRKD1. Binds to the PRKD1 promoter. Could play a role in the terminal differentiation of th...[+]
???displayGene.geneInteractants???
Human Physical (62), Co-citation (652)
Diseases: External Links:
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Gene ID & Location |
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Xenbase Gene ID | XB-GENE-485396 | XB-GENE-17339424 | XB-GENE-864834 | |||||||||
Gene Symbol | cdx1 | cdx1.L | cdx1.S | |||||||||
Chromosome | Chr3 | Chr3L | Chr3S | |||||||||
???displayGene.molecues??? | X. tropicalis | X. laevis.L | X. laevis.S | |||||||||
Genomic Sequence | Version 10.0 | Version 10.1 | Version 10.1 | |||||||||
CDS | CDS Gene Model | CDS Gene Model | CDS Gene Model | |||||||||
Entrez Gene | 395055 | 108710769 | 397695 | |||||||||
Ensembl Gene | cdx1 (ENSXETG00000010282) | |||||||||||
mRNA |
RefSeq
NCBI Nt
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NCBI Nt |
RefSeq
NCBI Nt
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Protein |
RefSeq
Swiss-Prot
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NCBI Protein
TrEMBL
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RefSeq
Swiss-Prot
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Reference Proteome | Q90X89 | A0A1L8GWE3 | Q91622 | |||||||||
AlphaFold | View on AlphaFold | View on AlphaFold | View on AlphaFold | |||||||||
???displayGene.genomic??? | X. tropicalis | X. laevis.L | X. laevis.S | |||||||||
Genome Browser (Click image to open in interactive Genome Browser) |
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Genomic Synteny | Xenbase Simple Synteny Genomicus PANTHER | |||||||||||
???displayGene.expression??? | Development Stages Embryonic Tissues Adult Tissues | |||||||||||
Summary for
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More Information |
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Proteomics | X. tropicalis | X. laevis.L | X. laevis.S | |||||||||
Embryonic Protein Expression | Stage profile: cdx1.S | |||||||||||
???displayGene.mophenotype??? | ||||||||||||
???displayGene.mosmith??? | tneu087f10 | |||||||||||
Orthology |
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???displayGene.human??? |
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???displayGene.mouse??? |
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rat |
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???displayGene.zebrafish??? |
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chicken |
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fruit fly |
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Publications | ||||||||||||
First |
The Xenopus Ets transcription factor XER81 is a target of the FGF signaling pathway., Mech Dev 1999 |
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Most Recent |
Histological and gene-expression analyses of pyloric sphincter formation during stomach metamorphosis in Xenopus laevis., Dev Biol 2024 |
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All | ???displayGene.papersAll??? 9 ???displayGene.morpholinoPapers??? 1 ???displayGene.omimPapers??? | |||||||||||
Functional Ontologies | X. tropicalis | X. laevis.L | X. laevis.S | |||||||||
GO | 5 terms | 3 terms | 11 terms | |||||||||
KEGG Pathways | ||||||||||||
KOG |
[K] Transcription factor Caudal, contains HOX domain
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Reagents | X. tropicalis | X. laevis.L | X. laevis.S | |||||||||
CRISPRscan Tracks | cdx1 | cdx1.L | cdx1.S | |||||||||
Morpholinos | cdx1 MO1, cdx1 MO2, cdx1 MO3, cdx1 MO4 | cdx1 MO1, cdx1 MO3, cdx1 MO4 | cdx1 MO1, cdx1 MO3, cdx1 MO4 | |||||||||
Clones | Horizon | Horizon | Horizon | |||||||||
Plasmids | Addgene.org | Addgene.org |
Symbol legend: Blast sequence View sequence Literature or expression images Hover cursor for info