Fig. 9. Regionalized expression pattern of clones giving rise to dorso-anteriorized phenotypes. Six clones from this synphenotype group gave rise to restricted expression patterns. The images are ordered by clone name. For each clone the species and annotation of the closest matching blastx hit is shown. Abbreviations are: d, dorsal view (stage 15 and 17); l, lateral view (stage 28 and 30); v, vegetal view (stage 11).
Image published in: Chen JA et al. (2005)
Copyright © 2005. Image reproduced with permission of the Publisher, Elsevier B. V.
| Gene | Synonyms | Species | Stage(s) | Tissue |
|---|---|---|---|---|
| foxd4l1 | foxd4, foxd4l1.1, foxd4l1.1-a, foxd4l1.1-b, foxd5, foxD5a, FoxD5b, Xfd-12, XFlip, xlFoxD5a, xlFoxD5b, xtFoxD5 | X. tropicalis | Throughout NF stage 11 | dorsal marginal zone |
| hes4 | H2, hairy2, hairy2a, hairy2b, hes4-a, hes4a, hes4-b, hes4b, Xhairy2, XHairy2a, Xhairy2b | X. tropicalis | Throughout NF stage 11 | marginal zone dorsal |
| nodal | nodal4, Nodal homolog 4, nr4, Xnr-4, Xnr4 | X. tropicalis | Throughout NF stage 11 | mesoderm axial mesoderm involuted dorsal mesoderm upper blastopore lip |
| calu | calumenin, crocalbin | X. tropicalis | Throughout NF stage 11 | dorsal |
| chrd | chd, chordin, chrd.1, LOC108716939, X-chordin | X. tropicalis | Throughout NF stage 11 | axial mesoderm upper blastopore lip involuted dorsal mesoderm |
| chrd | chd, chordin, chrd.1, LOC108716939, X-chordin | X. tropicalis | Throughout NF stage 15 | axial mesoderm notochord |
| sfrp1 | frp, frp-1, frp1, frzA, sarp2, XfrzA | X. tropicalis | Throughout NF stage 15 | lateral plate mesoderm |
| foxd4l1 | foxd4, foxd4l1.1, foxd4l1.1-a, foxd4l1.1-b, foxd5, foxD5a, FoxD5b, Xfd-12, XFlip, xlFoxD5a, xlFoxD5b, xtFoxD5 | X. tropicalis | Throughout NF stage 17 | anterior |
| hes4 | H2, hairy2, hairy2a, hairy2b, hes4-a, hes4a, hes4-b, hes4b, Xhairy2, XHairy2a, Xhairy2b | X. tropicalis | Throughout NF stage 17 | anterior neural fold neural plate pre-chordal neural plate chordal neural plate |
| calu | calumenin, crocalbin | X. tropicalis | Throughout NF stage 17 | anterior |
| chrd | chd, chordin, chrd.1, LOC108716939, X-chordin | X. tropicalis | Throughout NF stage 28 | notochord chordoneural hinge |
| foxd4l1 | foxd4, foxd4l1.1, foxd4l1.1-a, foxd4l1.1-b, foxd5, foxD5a, FoxD5b, Xfd-12, XFlip, xlFoxD5a, xlFoxD5b, xtFoxD5 | X. tropicalis | Throughout NF stage 29 and 30 | otic vesicle branchial arch tail bud anterior dorsal lateral plate region eye spinal cord roof plate intersomitic region |
| hes4 | H2, hairy2, hairy2a, hairy2b, hes4-a, hes4a, hes4-b, hes4b, Xhairy2, XHairy2a, Xhairy2b | X. tropicalis | Throughout NF stage 29 and 30 | tail bud posterior |
| calu | calumenin, crocalbin | X. tropicalis | Throughout NF stage 29 and 30 | otic vesicle pharyngeal arch eye forebrain tail region head region |
| sfrp1 | frp, frp-1, frp1, frzA, sarp2, XfrzA | X. tropicalis | Throughout NF stage 29 and 30 | head region heart duct of Cuvier prechordal plate |
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